RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 NDUFA5Q16718 116 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 TMEM128Q5BJH2 165 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 SOHLH1Q5JUK2 328 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 LY6G6FQ5SQ64 297 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 AADACL3Q5VUY0 350 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 CTRB2Q6GPI1 263 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 Q6ZR54 194 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 MOB3BQ86TA1 216 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 LYPD1Q8N2G4 141 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 UXS1Q8NBZ7 420 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 OR11H4Q8NGC9 324 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 OR9G4Q8NGQ1 327 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 OR2T10Q8NGZ9 312 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 OR9G1Q8NH87 305 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 C11orf45Q8TAV5 145 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 C5orf30Q96GV9 206 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 CMSS1Q9BQ75 279 aaKnown RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 FAAP24Q9BTP7 215 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 GAL3ST2Q9H3Q3 398 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 RIMS4Q9H426 269 aaPredicted RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 SPACA1Q9HBV2 294 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 HES4Q9HCC6 221 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 AK3Q9UIJ7 227 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 ST3GAL6Q9Y274 331 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 TP53TG1Q9Y2A0 90 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 STRAPQ9Y3F4 350 aaKnown RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 AMMECR1Q9Y4X0 333 aaPredicted RBP5.12□□□□□ -1.59
CHD3-213ENST00000571249 FAT3Q8TDW7 4589 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 PKHD1L1Q86WI1 4243 aa5.12□□□□□ -1.59
CHD3-213ENST00000571249 FSIP2Q5CZC0 6907 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 IGKV1D-8A0A087WSZ0 117 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 TRGV10A0A0A0MS01 117 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 CBY3A6NI87 242 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 F8VVB4 439 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 F8VWA3 439 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 SMLR1H3BR10 107 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 ATP6V0E1O15342 81 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 NXPH3O95157 252 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 SMR3BP02814 79 aaPredicted RBP5.11□□□□□ -1.59
CHD3-213ENST00000571249 CSN3P07498 182 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 BCL3P20749 454 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 GABRR1P24046 479 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 NFYBP25208 207 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 HAAOP46952 286 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 OR3A3P47888 321 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 GLIPR1P48060 266 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 XGP55808 180 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 P2RX3P56373 397 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 H2BFSP57053 126 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 PPP1R1AQ13522 171 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 KLF5Q13887 457 aaPredicted RBP5.11□□□□□ -1.59
CHD3-213ENST00000571249 GAMTQ14353 236 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 DEFB135Q30KP9 77 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 PIGYQ3MUY2 71 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 LGALSLQ3ZCW2 172 aaPredicted RBP5.11□□□□□ -1.59
CHD3-213ENST00000571249 SCGB2B2Q4G0G5 96 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 ZNF880Q6PDB4 577 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 SPATA12Q7Z6I5 190 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 Q8IYB0 196 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 GAPTQ8N292 157 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 POM121L12Q8N7R1 296 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 OR52B4Q8NGK2 314 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 OR2T35Q8NGX2 323 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 MARCH1Q8TCQ1 289 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 FRZBQ92765 325 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 LEAP2Q969E1 77 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 TMEM230Q96A57 120 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 CYYR1Q96J86 154 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 RTBDNQ9BSG5 229 aaPredicted RBP5.11□□□□□ -1.59
CHD3-213ENST00000571249 MFFQ9GZY8 342 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 C5orf66Q9H5L9 145 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 C12orf4Q9NQ89 552 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 PARP11Q9NR21 331 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 MGAT4AQ9UM21 535 aa5.11□□□□□ -1.59
CHD3-213ENST00000571249 OR5H14A6NHG9 310 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 J3QR06 171 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 PRYO14603 147 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 SOX15O60248 233 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 TSC22D2O75157 780 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 SLC22A5O76082 557 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 SFT2D2O95562 160 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 MOSP00540 346 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 HLA-AP01891 365 aaKnown RBP5.1□□□□□ -1.59
CHD3-213ENST00000571249 CSN2P05814 226 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 CTSDP07339 412 aaPredicted RBP5.1□□□□□ -1.59
CHD3-213ENST00000571249 ZP3P21754 424 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 REG1BP48304 166 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 SYNJ2BPP57105 145 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 TSPAN5P62079 268 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 ZNF146Q15072 292 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 GUCA2BQ16661 112 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 AARDQ4LEZ3 155 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 Q6P435 159 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 Q6ZWC4 215 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 ZNF767PQ75MW2 155 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 TMED4Q7Z7H5 227 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 FAM58AQ8N1B3 248 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 ADAD2Q8NCV1 583 aaKnown RBP5.1□□□□□ -1.59
CHD3-213ENST00000571249 OR2K2Q8NGT1 345 aa5.1□□□□□ -1.59
CHD3-213ENST00000571249 GRPEL2Q8TAA5 225 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms