RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 VN1R17PQ8TDU5 208 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 RAB2BQ8WUD1 216 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 WDR89Q96FK6 387 aaPredicted RBP4.07□□□□□ -1.76
CHD3-212ENST00000570758 ZNF486Q96H40 463 aaPredicted RBP4.07□□□□□ -1.76
CHD3-212ENST00000570758 TSC22D3Q99576 134 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 NEURL2Q9BR09 285 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 CHRDL1Q9BU40 450 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 ZNF436Q9C0F3 470 aaPredicted RBP4.07□□□□□ -1.76
CHD3-212ENST00000570758 TUBA4BQ9H853 241 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 PLEKHA3Q9HB20 300 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 FKBP11Q9NYL4 201 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 CCDC59Q9P031 241 aaKnown RBP4.07□□□□□ -1.76
CHD3-212ENST00000570758 MLXQ9UH92 298 aa4.07□□□□□ -1.76
CHD3-212ENST00000570758 COL7A1Q02388 2944 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 IGHV3OR16-8A0A075B7F1 116 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 A0A0B4J293 547 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 C3orf85A0A1B0GTC6 90 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 RBMY1BA6NDE4 496 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 RBMY1EA6NEQ0 496 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 H3BMQ9 156 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 I3L2K1 104 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 CTDSPLO15194 276 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 ST8SIA3O43173 380 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 ZNF207O43670 478 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 SCAF4O95104 1147 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 IGHV3-48P01763 117 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 CTSDP07339 412 aaPredicted RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 RBMY1DP0C7P1 496 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 C8orf88P0DMB2 117 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 TBPP20226 339 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 ADMP35318 185 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 RPL5P46777 297 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 HSPE1P61604 102 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 MRPS10P82664 201 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 PRCDQ00LT1 54 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 ZNF57Q68EA5 555 aaPredicted RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 BTNL8Q6UX41 500 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 DEFB125Q8N687 156 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 OR4C16Q8NGL9 310 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 OR1P1Q8NH06 330 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 OR4A16Q8NH70 328 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 TERB2Q8NHR7 220 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 SCARB1Q8WTV0 552 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 C15orf40Q8WUR7 153 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 SMIM4Q8WVI0 70 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 TMEM190Q8WZ59 177 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 ISOC1Q96CN7 298 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 MISP3Q96FF7 219 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 DIRAS2Q96HU8 199 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 TMEM56Q96MV1 263 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 SOSTQ9BQB4 213 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 BCL7BQ9BQE9 202 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 RTBDNQ9BSG5 229 aaPredicted RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 SLIRPQ9GZT3 109 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 ZMAT4Q9H898 229 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 RETNQ9HD89 108 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 C21orf62Q9NYP8 219 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 TECRQ9NZ01 308 aaKnown RBP4.06□□□□□ -1.76
CHD3-212ENST00000570758 THYN1Q9P016 225 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 COPZ2Q9P299 210 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 CEPT1Q9Y6K0 416 aa4.06□□□□□ -1.76
CHD3-212ENST00000570758 ANKRD20A5PA0PJZ0 165 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 DISC1C4P0D8 188 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 CYB5BO43169 146 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 GSTZ1O43708 216 aaPredicted RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 MT-CO2P00403 227 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 CTSGP08311 255 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 OR5AC1P0C628 307 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 AKAIN1P0CW23 69 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 UCP1P25874 307 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 TNFSF8P32971 234 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 ELLP55199 621 aaPredicted RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 SSBP1Q04837 148 aaKnown RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 IL18Q14116 193 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 MEF2DQ14814 521 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 TRIM16LQ309B1 348 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 Q56UQ5 140 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 SPSB3Q6PJ21 355 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 Q6ZRM9 215 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 CCDC71LQ8N9Z2 235 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 UBAC2Q8NBM4 344 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 ZNF114Q8NC26 417 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 OR1L6Q8NGR2 347 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 MCFD2Q8NI22 146 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 LHFPL5Q8TAF8 219 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 MUC7Q8TAX7 377 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 ZFAND1Q8TCF1 268 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 MARC2Q969Z3 335 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 BSCL2Q96G97 398 aaPredicted RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 CITED4Q96RK1 184 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 ATP6V0BQ99437 205 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 C6orf62Q9GZU0 229 aaPredicted RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 NXF2Q9GZY0 626 aaKnown RBP4.05□□□□□ -1.76
CHD3-212ENST00000570758 C5orf66Q9H5L9 145 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 NAA60Q9H7X0 242 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 SRD5A3Q9H8P0 318 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 PALMDQ9NP74 551 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 SLC2A8Q9NY64 477 aa4.05□□□□□ -1.76
CHD3-212ENST00000570758 PRR13Q9NZ81 148 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms