RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 OR13A1Q8NGR1 328 aa12.71□□□□□ -0.38
SMG6-207ENST00000570756 RFESDQ8TAC1 157 aa12.71□□□□□ -0.38
SMG6-207ENST00000570756 TMEM140Q9NV12 185 aa12.71□□□□□ -0.38
SMG6-207ENST00000570756 KIR2DS2P43631 304 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 RHOGP84095 191 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 SPACA3Q8IXA5 215 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 PTPRBP23467 1997 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 M0R1X1 148 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 OR7C2O60412 319 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 SMPD2O60906 423 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 IGLV2-8P01709 118 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 IGFBP2P18065 325 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 PPP1R32Q7Z5V6 425 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 VKORC1L1Q8N0U8 176 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 IFI44Q8TCB0 444 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 Q8TCH9 128 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 IGF2BP2-AS1Q96M15 143 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 S1PR3Q99500 378 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 FAM173AQ9BQD7 235 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 FSCN3Q9NQT6 498 aa12.7□□□□□ -0.38
SMG6-207ENST00000570756 RIF1Q5UIP0 2472 aaKnown RBP12.69□□□□□ -0.38
SMG6-207ENST00000570756 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.69□□□□□ -0.38
SMG6-207ENST00000570756 A0A1W2PRE2 83 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 IQCF6A8MYZ5 107 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 WNT9BO14905 357 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 CCL4P13236 92 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 ARG2P78540 354 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 FAM162BQ5T6X4 162 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 BCL2L2Q92843 193 aaPredicted RBP12.69□□□□□ -0.38
SMG6-207ENST00000570756 OR2V2Q96R30 315 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 NABP2Q9BQ15 211 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 VPS25Q9BRG1 176 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 C19orf24Q9BVV8 132 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 ST20Q9HBF5 79 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 C15orf61A6NNL5 157 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 GGTLC3B5MD39 225 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 RNASEKQ6P5S7 137 aaKnown RBP12.69□□□□□ -0.38
SMG6-207ENST00000570756 ACP7Q6ZNF0 438 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 Q6ZR03 302 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 NEUROG1Q92886 237 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 TRIB1Q96RU8 372 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 TMEM70Q9BUB7 260 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 FAM234AQ9H0X4 552 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 OBP2BQ9NPH6 170 aa12.69□□□□□ -0.38
SMG6-207ENST00000570756 TRAV3A0A0B4J244 114 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 C2orf70A6NJV1 201 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 MFAP2P55001 183 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 TPRX1Q8N7U7 411 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 TNFRSF19Q9NS68 423 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 GNG12Q9UBI6 72 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 TET2Q6N021 2002 aaPredicted RBP12.68□□□□□ -0.38
SMG6-207ENST00000570756 TOX4O94842 621 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 CELA3AP09093 270 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 SPINK14Q6IE38 97 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 LOXL2Q9Y4K0 774 aa12.68□□□□□ -0.38
SMG6-207ENST00000570756 C15orf65H3BRN8 121 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 PROP1O75360 226 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 LTC4SQ16873 150 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 FAM231DQ6ZW35 169 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 OR4S2Q8NH73 311 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 ZNF596Q8TC21 504 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 CHRDL1Q9BU40 450 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 CST9LQ9H4G1 147 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 C12orf49Q9H741 205 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 JPT1Q9UK76 154 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 ZNF292O60281 2723 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 CBY3A6NI87 242 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 OR2J3O76001 311 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
SMG6-207ENST00000570756 HSPE1P61604 102 aaKnown RBP12.67□□□□□ -0.38
SMG6-207ENST00000570756 SMIM21Q3B7S5 101 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 ALKBH6Q3KRA9 238 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 OCIAD2Q56VL3 154 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 ZNF826PQ6ZT77 177 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 FAM214BQ7L5A3 538 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 CXorf67Q86X51 503 aaPredicted RBP12.67□□□□□ -0.38
SMG6-207ENST00000570756 SLC25A40Q8TBP6 338 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 DOCK7Q96N67 2140 aa12.67□□□□□ -0.38
SMG6-207ENST00000570756 FOXA2Q9Y261 457 aaPredicted RBP12.67□□□□□ -0.38
SMG6-207ENST00000570756 M0QZ24 198 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 SP9P0CG40 484 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 LDLRAD2Q5SZI1 272 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 ZNF503Q96F45 646 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 GRAMD2BQ96HH9 432 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 OR4C46A6NHA9 309 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 MPV17L2Q567V2 206 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 C12orf54Q6X4T0 127 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 C1RLQ9NZP8 487 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 WASHC3Q9Y3C0 194 aa12.66□□□□□ -0.38
SMG6-207ENST00000570756 RPL8P62917 257 aaKnown RBP12.65□□□□□ -0.38
SMG6-207ENST00000570756 MBD6Q96DN6 1003 aa12.65□□□□□ -0.38
SMG6-207ENST00000570756 SSBP3Q9BWW4 388 aaPredicted RBP12.65□□□□□ -0.38
SMG6-207ENST00000570756 CXXC4Q9H2H0 198 aa12.65□□□□□ -0.38
SMG6-207ENST00000570756 TMEM14BQ9NUH8 114 aa12.65□□□□□ -0.38
SMG6-207ENST00000570756 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
SMG6-207ENST00000570756 PATE3B3GLJ2 98 aa12.64□□□□□ -0.39
SMG6-207ENST00000570756 TAX1BP3O14907 124 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms