RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 HARBI1Q96MB7 349 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 SLC45A2Q9UMX9 530 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 COX7A2P2O60397 106 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 TPPP3Q9BW30 176 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 ZNF439Q8NDP4 499 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 JPT1Q9UK76 154 aa12.63□□□□□ -0.39
USP43-202ENST00000570475 MFAP2P55001 183 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 TMEM183BQ1AE95 376 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 HCP5Q6MZN7 132 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
USP43-202ENST00000570475 TMEM106BQ9NUM4 274 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 AHRRA9YTQ3 701 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 SP9P0CG40 484 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 GPR6P46095 362 aaPredicted RBP12.62□□□□□ -0.39
USP43-202ENST00000570475 FAM27E3Q08E93 113 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 EAF1Q96JC9 268 aaPredicted RBP12.62□□□□□ -0.39
USP43-202ENST00000570475 PYGO2Q9BRQ0 406 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 MRPL37Q9BZE1 423 aaKnown RBP12.62□□□□□ -0.39
USP43-202ENST00000570475 ZNF355PQ9NSJ1 428 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 TECRQ9NZ01 308 aaKnown RBP12.62□□□□□ -0.39
USP43-202ENST00000570475 IL36BQ9NZH7 164 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 IL19Q9UHD0 177 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 DCHS1Q96JQ0 3298 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 HSBP1O75506 76 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 PYYP10082 97 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 TNFSF4P23510 183 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 TAS2R45P59539 299 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 ZNF124Q15973 351 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 IBA57Q5T440 356 aaKnown RBP12.62□□□□□ -0.39
USP43-202ENST00000570475 ST6GALNAC3Q8NDV1 305 aa12.62□□□□□ -0.39
USP43-202ENST00000570475 CEP295Q9C0D2 2601 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 MALRD1Q5VYJ5 2156 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 MMP23AO75900 390 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 CCL3L1P16619 93 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 USF1P22415 310 aaPredicted RBP12.61□□□□□ -0.39
USP43-202ENST00000570475 SP5Q6BEB4 398 aaPredicted RBP12.61□□□□□ -0.39
USP43-202ENST00000570475 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 OTOGLQ3ZCN5 2332 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 CDX4O14627 284 aaPredicted RBP12.61□□□□□ -0.39
USP43-202ENST00000570475 RAB7AP51149 207 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 PEAR1Q5VY43 1037 aaPredicted RBP12.61□□□□□ -0.39
USP43-202ENST00000570475 GUCD1Q96NT3 240 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 IFI27L2Q9H2X8 130 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 TBL2Q9Y4P3 447 aaKnown RBP12.61□□□□□ -0.39
USP43-202ENST00000570475 C15orf65H3BRN8 121 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 K7EN84 100 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 APOA2P02652 100 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 LINC00869P0C866 280 aa12.61□□□□□ -0.39
USP43-202ENST00000570475 ERHP84090 104 aaKnown RBP12.61□□□□□ -0.39
USP43-202ENST00000570475 SSBP4Q9BWG4 385 aaPredicted RBP12.61□□□□□ -0.39
USP43-202ENST00000570475 UBE2G1P62253 170 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 ACSF3Q4G176 576 aaPredicted RBP12.6□□□□□ -0.39
USP43-202ENST00000570475 Q6ZN92 141 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 Q6ZWC4 215 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 TCTEX1D1Q8N7M0 179 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 OR2D3Q8NGH3 330 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 RNF7Q9UBF6 113 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 PRR33A8MZF0 331 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 ZNF137PP52743 207 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 Q56UQ5 140 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 CORO2AQ92828 525 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 PARD6GQ9BYG4 376 aaPredicted RBP12.6□□□□□ -0.39
USP43-202ENST00000570475 GNB4Q9HAV0 340 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 ZNF835Q9Y2P0 537 aa12.6□□□□□ -0.39
USP43-202ENST00000570475 A0A1W2PRD5 423 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 A0A1W2PRF3 423 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 A0A1W2PRM7 423 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 MSMPQ1L6U9 139 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
USP43-202ENST00000570475 OR5B3Q8NH48 314 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 NPIPB3Q92617 1050 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 C15orf61A6NNL5 157 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 NUTF2P61970 127 aaKnown RBP12.59□□□□□ -0.39
USP43-202ENST00000570475 CENPVQ7Z7K6 275 aaPredicted RBP12.59□□□□□ -0.39
USP43-202ENST00000570475 ZADH2Q8N4Q0 377 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 OR1B1Q8NGR6 318 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 RNASEH2CQ8TDP1 164 aaKnown RBP12.59□□□□□ -0.39
USP43-202ENST00000570475 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 SRRM5B3KS81 715 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 IGKV3-15P01624 115 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 BRS3P32247 399 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 DLX1P56177 255 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 FOXL1Q12952 345 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 TMEM167BQ9NRX6 74 aa12.59□□□□□ -0.39
USP43-202ENST00000570475 M0R296 226 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 MOSP00540 346 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 VDAC2P45880 294 aaPredicted RBP12.58□□□□□ -0.4
USP43-202ENST00000570475 RPL15P61313 204 aaKnown RBP12.58□□□□□ -0.4
USP43-202ENST00000570475 ERASQ7Z444 233 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 C2orf88Q9BSF0 95 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 J3QW42 95 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 YPEL1O60688 119 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 SLC25A5P05141 298 aaKnown RBP12.58□□□□□ -0.4
USP43-202ENST00000570475 FOXA3P55318 350 aaPredicted RBP12.58□□□□□ -0.4
USP43-202ENST00000570475 GNG5P63218 68 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 PLGLAQ15195 96 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 LCN12Q6JVE5 192 aa12.58□□□□□ -0.4
USP43-202ENST00000570475 YPEL2Q96QA6 119 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms