RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 SSSCA1O60232 199 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 IFNA1P01562 189 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 COL8A1P27658 744 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 RHOGP84095 191 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 SERF2P84101 59 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 NMSQ5H8A3 153 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 RNF183Q96D59 192 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 SPIN2AQ99865 258 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 SPIN2BQ9BPZ2 258 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 CST9LQ9H4G1 147 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 UQCR10Q9UDW1 63 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 ARHGAP21Q5T5U3 1957 aa6.62□□□□□ -1.35
TCF4-246ENST00000570287 TRGV5A0A0B4J1U4 118 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 KIR2DS1A0A191URI9 304 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 A0A1B0GUS0 222 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 MPPED1O15442 326 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 WISP2O76076 250 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 WNT2P09544 360 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 IGLC2P0DOY2 106 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 IGLC3P0DOY3 106 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 OMGP23515 440 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 KIR2DS4P43632 304 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 AESQ08117 197 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 KIR2DS1Q14954 304 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 CDSNQ15517 529 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 KLHDC1Q8N7A1 406 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 TMEM178AQ8NBL3 297 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 OR2Z1Q8NG97 314 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 IL22RA2Q969J5 263 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 ZNF503Q96F45 646 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 DEFB127Q9H1M4 99 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 VSIRQ9H7M9 311 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 TSSC4Q9Y5U2 329 aaPredicted RBP6.61□□□□□ -1.35
TCF4-246ENST00000570287 ZNF407Q9C0G0 2248 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 BDP1A6H8Y1 2624 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 KNTC1P50748 2209 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 TRAV30A0A087WSZ9 112 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 C3orf85A0A1B0GTC6 90 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 SLC22A20A6NK97 555 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 CEBPZOSA8MTT3 80 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 PHF1O43189 567 aaPredicted RBP6.61□□□□□ -1.35
TCF4-246ENST00000570287 PPOXP50336 477 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 GNG3P63215 75 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 ARG2P78540 354 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 ZNF154Q13106 437 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 C1orf174Q8IYL3 243 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 ZNF738Q8NE65 137 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 GPR146Q96CH1 333 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 COQ2Q96H96 371 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 SFRP2Q96HF1 295 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 PARLQ9H300 379 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 ZDHHC11Q9H8X9 412 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 MRPS16Q9Y3D3 137 aaKnown RBP6.61□□□□□ -1.35
TCF4-246ENST00000570287 TRAPPC1Q9Y5R8 145 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 DNAJC13O75165 2243 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 NCOR1O75376 2440 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 ZNHIT1O43257 154 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 SYNGR1O43759 233 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 HYPMO75409 117 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 CST7O76096 145 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 TCTEX1D4Q5JR98 221 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 MRPL27Q9P0M9 148 aaKnown RBP6.61□□□□□ -1.35
TCF4-246ENST00000570287 SPRR3Q9UBC9 169 aa6.61□□□□□ -1.35
TCF4-246ENST00000570287 SHANK1Q9Y566 2161 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 TRBV6-6A0A0A6YYG2 114 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 GFRA3O60609 400 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 ZNF737O75373 536 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 MDH2P40926 338 aaKnown RBP6.6□□□□□ -1.35
TCF4-246ENST00000570287 TRIP6Q15654 476 aaKnown RBP6.6□□□□□ -1.35
TCF4-246ENST00000570287 MMD2Q8IY49 270 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 SSBP4Q9BWG4 385 aaPredicted RBP6.6□□□□□ -1.35
TCF4-246ENST00000570287 ELOVL5Q9NYP7 299 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 PPIAL4AQ9Y536 164 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 CRYGBP07316 175 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 SCTP09683 121 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 BMP5P22003 454 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 SSTR5P35346 364 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 Q0VG73 95 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 ATP1A1-AS1Q5TC04 95 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 MDP1Q86V88 176 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 LRP11Q86VZ4 500 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 GMPPAQ96IJ6 420 aaPredicted RBP6.6□□□□□ -1.35
TCF4-246ENST00000570287 IL36RNQ9UBH0 155 aa6.6□□□□□ -1.35
TCF4-246ENST00000570287 K7ERU9 68 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 GYPAP02724 150 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 TBC1D28Q2M2D7 210 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 LCN15Q6UWW0 184 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 LINC00482Q8N8I6 264 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 OR5AU1Q8NGC0 362 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 VN1R17PQ8TDU5 208 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 HSPB9Q9BQS6 159 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 RSG1Q9BU20 258 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 DLL3Q9NYJ7 618 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 OR2J3O76001 311 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 OR10J4P0C629 311 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 LRRC75BQ2VPJ9 315 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 MTURNQ8N3F0 131 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 OR4P4Q8NGL7 312 aa6.59□□□□□ -1.35
TCF4-246ENST00000570287 MRPL30Q8TCC3 161 aaKnown RBP6.59□□□□□ -1.35
TCF4-246ENST00000570287 TAAR3PQ9P1P4 343 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms