RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 SLC35E1Q96K37 410 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 HARBI1Q96MB7 349 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 WFIKKN1Q96NZ8 548 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 TXN2Q99757 166 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 SMIM7Q9BQ49 75 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 SLC25A22Q9H936 323 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 WASHC3Q9Y3C0 194 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 AMMECR1Q9Y4X0 333 aaPredicted RBP4.69□□□□□ -1.66
CDH13-213ENST00000569454 LSM4Q9Y4Z0 139 aaKnown RBP4.69□□□□□ -1.66
CDH13-213ENST00000569454 OR51B2Q9Y5P1 312 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 RYR3Q15413 4870 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 APC2O95996 2303 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 SVILO95425 2214 aa4.69□□□□□ -1.66
CDH13-213ENST00000569454 USF3Q68DE3 2245 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 TANC2Q9HCD6 1990 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 NIPBLQ6KC79 2804 aaeCLIP4.68□□□□□ -1.66
CDH13-213ENST00000569454 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 E7EQL1 145 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 H0YJW9 148 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 TNFRSF13BO14836 293 aaPredicted RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 CXorf1O96002 111 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 IGKV1D-33P01593 117 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 IGKV1-33P01594 117 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 CT45A6P0DMU7 189 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 CT45A5P0DMU8 189 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 CT45A7P0DMV0 189 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 CD99P14209 185 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 S100PP25815 95 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 LOXP28300 417 aaPredicted RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 LGALS7P47929 136 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 GNG10P50151 68 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 CEBPGP53567 150 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 SUB1P53999 127 aaKnown RBP eCLIP4.68□□□□□ -1.66
CDH13-213ENST00000569454 FGF8P55075 233 aaPredicted RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 RPL8P62917 257 aaKnown RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 ERHP84090 104 aaKnown RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 TMEM241Q24JQ0 296 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 ZNF674Q2M3X9 581 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 HLA-DRB5Q30154 266 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 BSXQ3C1V8 233 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 VMA21Q3ZAQ7 101 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 KIAA2026Q5HYC2 2103 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 WDR25Q64LD2 544 aaPredicted RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 TMEM200BQ69YZ2 307 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 TGIF2LYQ8IUE0 185 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 TGIF2LXQ8IUE1 241 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 DMRTC2Q8IXT2 367 aaPredicted RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 PNKDQ8N490 385 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 TMEM167AQ8TBQ9 72 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 RNASEH2CQ8TDP1 164 aaKnown RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 TMEM190Q8WZ59 177 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 H1FXQ92522 213 aaKnown RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 CCL17Q92583 94 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 FLYWCH2Q96CP2 140 aaKnown RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 EAF1Q96JC9 268 aaPredicted RBP4.68□□□□□ -1.66
CDH13-213ENST00000569454 RNF2Q99496 336 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 C20orf24Q9BUV8 137 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 GGTLC1Q9BX51 225 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 COMMD5Q9GZQ3 224 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 VSIRQ9H7M9 311 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 SDF2L1Q9HCN8 221 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 CBY1Q9Y3M2 126 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 RFNGQ9Y644 331 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 PXMP4Q9Y6I8 212 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 ACACAQ13085 2346 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 PLCE1Q9P212 2302 aa4.68□□□□□ -1.66
CDH13-213ENST00000569454 ANKHD1Q8IWZ3 2542 aaKnown RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 TRBV24-1A0A075B6N3 115 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 C11orf94C9JXX5 98 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 DVL1O14640 695 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 RRHO14718 337 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 PPP1R2P9O14990 202 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 ATXN7O15265 892 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 CLN5O75503 358 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 FBP1P09467 338 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 STAG3L2P0CL84 134 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 STAG3L3P0CL85 134 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 SAA1P0DJI8 122 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 IGHV1-8P0DP01 117 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 GPX4P36969 197 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 COMPP49747 757 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 PRRX1P54821 245 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 DLX6P56179 175 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 TAS2R45P59539 299 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 CD81P60033 236 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 COTL1Q14019 142 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 HABP2Q14520 560 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 ZNF124Q15973 351 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 ZNF672Q499Z4 452 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 PRR30Q53SZ7 412 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 SPINK9Q5DT21 86 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 DUX4L9Q6RFH8 374 aaPredicted RBP4.67□□□□□ -1.66
CDH13-213ENST00000569454 CLEC2AQ6UVW9 174 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 SSX7Q7RTT5 188 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 TMEM144Q7Z5S9 345 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 VKORC1L1Q8N0U8 176 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 LINC00528Q8N1L1 170 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 MUC15Q8N387 334 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 FAM24BQ8N5W8 94 aa4.67□□□□□ -1.66
CDH13-213ENST00000569454 Q8N7P7 452 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms