RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 PMP2P02689 132 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 HOXB5P09067 269 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 LGALS1P09382 135 aaKnown RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 HOXA5P20719 270 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 NFYBP25208 207 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 PPIFP30405 207 aaKnown RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 FCGR2CP31995 323 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 PPT1P50897 306 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 RAB9AP51151 201 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 PRRX1P54821 245 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 TNFRSF9Q07011 255 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 DIAPH2-AS1Q14236 149 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 RSU1Q15404 277 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 ANKRD55Q3KP44 614 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 RPL7L1Q6DKI1 246 aaKnown RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 Q6ZSR3 168 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 Q8N6K4 173 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 GVQW1Q8N7I0 195 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 OR10G4Q8NGN3 311 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 FGGYQ96C11 551 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 CLCC1Q96S66 551 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 RTBDNQ9BSG5 229 aaPredicted RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 FBXL17Q9UF56 701 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 KCNIP3Q9Y2W7 256 aa8.49□□□□□ -1.05
CDH3-208ENST00000569036 UBE2J1Q9Y385 318 aaPredicted RBP8.49□□□□□ -1.05
CDH3-208ENST00000569036 CRYM-AS1A6NIL9 109 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 DHRS7CA6NNS2 312 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 GNB3P16520 340 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 DTYMKP23919 212 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 S100A2P29034 98 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 SULT1A1P50225 295 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 RAB4BP61018 213 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 EBI3Q14213 229 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 ZNF266Q14584 549 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 IAH1Q2TAA2 248 aaPredicted RBP8.48□□□□□ -1.05
CDH3-208ENST00000569036 IGSF11Q5DX21 431 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 AADACL3Q5VUY0 350 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 GLIPR1L1Q6UWM5 242 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 DEFB125Q8N687 156 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 OR52N4Q8NGI2 321 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 OR5A2Q8NGI9 324 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 PP6455Q8WZ26 134 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 RNF183Q96D59 192 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 PGAM5Q96HS1 289 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 EAF1Q96JC9 268 aaPredicted RBP8.48□□□□□ -1.05
CDH3-208ENST00000569036 SNX22Q96L94 193 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 GAL3ST2Q9H3Q3 398 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 TMEM231Q9H6L2 316 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 OR2S2Q9NQN1 319 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 WSB1Q9Y6I7 421 aa8.48□□□□□ -1.05
CDH3-208ENST00000569036 A0A087X0M5 115 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 A0A1B0GX30 115 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 DUXBA0A1W2PPF3 345 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 IZUMO1RA6ND01 250 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 G3V318 75 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 CLN5O75503 358 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 NDUFB8O95169 186 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 HBE1P02100 147 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 MBPP02686 304 aaPredicted RBP8.47□□□□□ -1.05
CDH3-208ENST00000569036 HAAOP46952 286 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 CAMLGP49069 296 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 UCP3P55916 312 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 S100A10P60903 97 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 ERVK11-1P61568 191 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 ARFRP1Q13795 201 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 LCN12Q6JVE5 192 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 SLC16A13Q7RTY0 426 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 ZFP82Q8N141 532 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 OR13C9Q8NGT0 318 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 OR10C1Q96KK4 312 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 SCRT1Q9BWW7 348 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 WFDC10AQ9H1F0 79 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 SRD5A3Q9H8P0 318 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 SCRT2Q9NQ03 307 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 HSF4Q9ULV5 492 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 POLDIP2Q9Y2S7 368 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 FBXO7Q9Y3I1 522 aa8.47□□□□□ -1.05
CDH3-208ENST00000569036 AMMECR1Q9Y4X0 333 aaPredicted RBP8.47□□□□□ -1.05
CDH3-208ENST00000569036 A0A0U1RQV5 110 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 FAM90A10PA6NDY2 464 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 M0R036 132 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 ADAP1O75689 374 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 CDS2O95674 445 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 IGLV3-1P01715 115 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 RAB7AP51149 207 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 SNU13P55769 128 aaKnown RBP8.46□□□□□ -1.06
CDH3-208ENST00000569036 PNRC1Q12796 327 aaPredicted RBP8.46□□□□□ -1.06
CDH3-208ENST00000569036 PLAC9Q5JTB6 97 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 PLCXD3Q63HM9 321 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 ZNF565Q8N9K5 539 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 CCDC71LQ8N9Z2 235 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 RNASE11Q8TAA1 199 aaKnown RBP8.46□□□□□ -1.06
CDH3-208ENST00000569036 ADAT3Q96EY9 351 aaPredicted RBP8.46□□□□□ -1.06
CDH3-208ENST00000569036 S1PR3Q99500 378 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 SPIN2AQ99865 258 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 RASL11BQ9BPW5 248 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 SPIN2BQ9BPZ2 258 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 SPACA1Q9HBV2 294 aa8.46□□□□□ -1.06
CDH3-208ENST00000569036 TMEM242Q9NWH2 141 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms