RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 TMEM41BQ5BJD5 291 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 LEMD1Q68G75 181 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 STHQ8IWL8 128 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 OR1L8Q8NGR8 309 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 LSM10Q969L4 123 aaKnown RBP8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 CCDC90BQ9GZT6 254 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 PLEKHA2Q9HB19 425 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 CCL28Q9NRJ3 127 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 PKD1P98161 4303 aa8.56□□□□□ -1.04
GTF3C1-209ENST00000568569 M0R2N4 97 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 EIF4EP06730 217 aaKnown RBP8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 RAB3BP20337 219 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 FCGR2CP31995 323 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 DEFB131AP59861 70 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 ERVK-16P61578 105 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 ZNF773Q6PK81 442 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 DGCR14Q96DF8 476 aaKnown RBP8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 ZNF414Q96IQ9 312 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 MGLLQ99685 303 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 HINT2Q9BX68 163 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 NDUFA4L2Q9NRX3 87 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 COMMD9Q9P000 198 aa8.55□□□□□ -1.04
GTF3C1-209ENST00000568569 IGHV3OR16-13A0A075B7E8 117 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 IGHV3-74A0A0B4J1X5 117 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 TEX50A0A1B0GTY4 177 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 ZNF705EA8MWA4 302 aaPredicted RBP8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 SCGNO76038 276 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 PPYP01298 95 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 ARPC4P59998 168 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 RCN1Q15293 331 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 LGALS9BQ3B8N2 356 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 SLC5A7Q9GZV3 580 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 MS4A6AQ9H2W1 248 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 PLA2G2EQ9NZK7 142 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 TPRKBQ9Y3C4 175 aa8.54□□□□□ -1.04
GTF3C1-209ENST00000568569 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 DEFB131BA0A096LNP1 70 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 TRAV2A0A0B4J234 112 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 MARCH11A6NNE9 402 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 CASQ2O14958 399 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 ST8SIA3O43173 380 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 RGS10O43665 173 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 SSX5O60225 188 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 GIG44P09565 113 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 SPP1P10451 314 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 OGFRL1Q5TC84 451 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 AADACL3Q5VUY0 350 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 MORN3Q6PF18 240 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 ZNF575Q86XF7 245 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 OR1P1Q8NH06 330 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 GIMAP1Q8WWP7 306 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 NDUFAF3Q9BU61 184 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 NXF2Q9GZY0 626 aaKnown RBP8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 VCXQ9H320 206 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 DUSP21Q9H596 190 aa8.53□□□□□ -1.04
GTF3C1-209ENST00000568569 MFAP4P55083 255 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 FXYD4P59646 89 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 RPL11P62913 178 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 ZNF818PQ6ZRF7 136 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 TRPT1Q86TN4 253 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 FAM24BQ8N5W8 94 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 DUSP18Q8NEJ0 188 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 BEST4Q8NFU0 473 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 ST8SIA2Q92186 375 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 SLC25A46Q96AG3 418 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 TMEM56Q96MV1 263 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 TXN2Q99757 166 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 VSIRQ9H7M9 311 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 TBC1D24Q9ULP9 559 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 OR51B2Q9Y5P1 312 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 X6R8D5 127 aa8.52□□□□□ -1.05
GTF3C1-209ENST00000568569 I3L2K1 104 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 SNAPC5O75971 98 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 PTHLHP12272 177 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 C4BPBP20851 252 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 C12orf74Q32Q52 190 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 SOHLH1Q5JUK2 328 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 PRSS48Q7RTY5 328 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 TMEM17Q86X19 198 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 CADM3Q8N126 398 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 BORCS5Q969J3 196 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 MISP3Q96FF7 219 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 FKBP11Q9NYL4 201 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 NSG2Q9Y328 171 aa8.51□□□□□ -1.05
GTF3C1-209ENST00000568569 SMIM30A4D0T7 59 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 EBAG9O00559 213 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 GNG7O60262 68 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 KRASP01116 189 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 IFNA10P01566 189 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 APOHP02749 345 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 UBE2UQ5VVX9 321 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 TOMM20LQ6UXN7 152 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 ZNF767PQ75MW2 155 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 LILRB2Q8N423 598 aa8.5□□□□□ -1.05
GTF3C1-209ENST00000568569 TMEM231Q9H6L2 316 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms