RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 HSD17B13Q7Z5P4 300 aaPredicted RBP6.63□□□□□ -1.35
SF3B3-212ENST00000568539 TMEM68Q96MH6 324 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 NMES1Q9C002 83 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 PLEKHA3Q9HB20 300 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 WSB1Q9Y6I7 421 aa6.63□□□□□ -1.35
SF3B3-212ENST00000568539 WNK2Q9Y3S1 2297 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 hCG_2014768A0A024R1R8 64 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 CLPSL1A2RUU4 121 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 NPIPB5A8MRT5 1133 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 RGS13O14921 159 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 SYNGR2O43760 224 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 SOX15O60248 233 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 SCGB1D2O95969 90 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 REG1AP05451 166 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 CRYGCP07315 174 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 OR13C7P0DN81 318 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 CTRB1P17538 263 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 MDKP21741 143 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 PSMB6P28072 239 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 HOXA1P49639 335 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 POLR2GP62487 172 aaKnown RBP eCLIP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 CYCSP99999 105 aaKnown RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 CTRB2Q6GPI1 263 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 C11orf87Q6NUJ2 197 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 SHISA2Q6UWI4 295 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 TTC9CQ8N5M4 171 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 OR2C3Q8N628 320 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 FAM110DQ8TAY7 271 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 DTD1Q8TEA8 209 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 WIPF2Q8TF74 440 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 CHAC2Q8WUX2 184 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 ASB13Q8WXK3 278 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 GON7Q9BXV9 100 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 ZNF436Q9C0F3 470 aaPredicted RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 MAGT1Q9H0U3 335 aa6.62□□□□□ -1.35
SF3B3-212ENST00000568539 RCL1Q9Y2P8 373 aaKnown RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 SONP18583 2426 aaKnown RBP6.62□□□□□ -1.35
SF3B3-212ENST00000568539 TMEM89A2RUT3 159 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 PSMB11A5LHX3 300 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 K7EPK0 472 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 SSSCA1O60232 199 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 MED6O75586 246 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 TMEM50AO95807 157 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 IGLV1-40P01703 118 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 IGHG4P01861 327 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 GIPP09681 153 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-212ENST00000568539 PAX9P55771 341 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 PROK1P58294 105 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 RAP2BP61225 183 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 ERHP84090 104 aaKnown RBP6.61□□□□□ -1.35
SF3B3-212ENST00000568539 FOXL1Q12952 345 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 RAB32Q13637 225 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 KLK9Q2XQG4 91 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 BSXQ3C1V8 233 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 C10orf99Q6UWK7 81 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 C19orf35Q6ZS72 473 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 CENPVQ7Z7K6 275 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-212ENST00000568539 ZNF329Q86UD4 541 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 LILRB2Q8N423 598 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 KLHDC1Q8N7A1 406 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 ZNF114Q8NC26 417 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 OR5T1Q8NG75 326 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 PPP1R1CQ8WVI7 109 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 P2RX4Q99571 388 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 HIPK2Q9H2X6 1198 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 C11orf1Q9H5F2 150 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 ENY2Q9NPA8 101 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 HEYLQ9NQ87 328 aaPredicted RBP6.61□□□□□ -1.35
SF3B3-212ENST00000568539 KLK9Q9UKQ9 250 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 RNF114Q9Y508 228 aa6.61□□□□□ -1.35
SF3B3-212ENST00000568539 A0A1B0GUS0 222 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 WRBO00258 174 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 BRI3O95415 125 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 LY86O95711 162 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 PRH1P02810 166 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 RNASE2P10153 161 aaKnown RBP6.6□□□□□ -1.35
SF3B3-212ENST00000568539 IAPPP10997 89 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 PSMB8P28062 276 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 SNCAP37840 140 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 HTR2BP41595 481 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 BCAP31P51572 246 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 MFAP2P55001 183 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 TAS2R30P59541 319 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 S100A10P60903 97 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 SLC35B1P78383 322 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 CD83Q01151 205 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 LRRC37A5PQ49AS3 106 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 PVRIGQ6DKI7 326 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 SLC24A4Q8NFF2 622 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 OR1P1Q8NH06 330 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 TMEM170AQ8WVE7 144 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 SMIM8Q96KF7 97 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 CIB3Q96Q77 187 aaPredicted RBP6.6□□□□□ -1.35
SF3B3-212ENST00000568539 RAB40CQ96S21 281 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 C19orf24Q9BVV8 132 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 ZFP57Q9NU63 452 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 LSM5Q9Y4Y9 91 aaKnown RBP6.6□□□□□ -1.35
SF3B3-212ENST00000568539 DMRT1Q9Y5R6 373 aa6.6□□□□□ -1.35
SF3B3-212ENST00000568539 F11RQ9Y624 299 aaKnown RBP6.6□□□□□ -1.35
SF3B3-212ENST00000568539 IGLV11-55A0A075B6I3 123 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms