RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 KIAA1109Q2LD37 5005 aa11.11□□□□□ -0.63
COMMD4-223ENST00000568301 K7EIM0 57 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 SNAPC5O75971 98 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 KRASP01116 189 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 CTSDP07339 412 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-223ENST00000568301 CTSGP08311 255 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
COMMD4-223ENST00000568301 LPAR6P43657 344 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 OR5B3Q8NH48 314 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 FCAMRQ8WWV6 532 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 MOB3AQ96BX8 217 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 DGCR14Q96DF8 476 aaKnown RBP11.1□□□□□ -0.63
COMMD4-223ENST00000568301 TMEM56Q96MV1 263 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 HINT2Q9BX68 163 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 EHFQ9NZC4 300 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 OR51B2Q9Y5P1 312 aa11.1□□□□□ -0.63
COMMD4-223ENST00000568301 A0A087WXM4 84 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 XRCC3O43542 346 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 RLN1P04808 185 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 RFX2P48378 723 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 Q56UQ5 140 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 CMTM1Q8IZ96 169 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
COMMD4-223ENST00000568301 S100A16Q96FQ6 103 aaKnown RBP11.09□□□□□ -0.63
COMMD4-223ENST00000568301 CSTL1Q9H114 145 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 RNF167Q9H6Y7 350 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 IFT46Q9NQC8 304 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 PRNDQ9UKY0 176 aa11.09□□□□□ -0.63
COMMD4-223ENST00000568301 IGHV3OR16-8A0A075B7F1 116 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 LOC100506127A0A0U1RQW1 187 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 NUPL2O15504 423 aaKnown RBP11.08□□□□□ -0.64
COMMD4-223ENST00000568301 ZNF207O43670 478 aaKnown RBP11.08□□□□□ -0.64
COMMD4-223ENST00000568301 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-223ENST00000568301 G6PCP35575 357 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 RELQ04864 619 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-223ENST00000568301 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 UBAC2Q8NBM4 344 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 TSPAN14Q8NG11 270 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 OR1P1Q8NH06 330 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 GATAD1Q8WUU5 269 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 OR10C1Q96KK4 312 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 RNF2Q99496 336 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 TSC22D3Q99576 134 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 TXN2Q99757 166 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 ZNF2Q9BSG1 426 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-223ENST00000568301 RHPN1-AS1Q9BWJ2 59 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 ANAPC10Q9UM13 185 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 NSG2Q9Y328 171 aa11.08□□□□□ -0.64
COMMD4-223ENST00000568301 MEIS3P1A6NDR6 274 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 MPTX1A8MV57 137 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 CHEK1O14757 476 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 NAT1P18440 290 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 TAS2R46P59540 309 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 CROCCP3Q8IVE0 287 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 APRG1Q8IVJ8 170 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 OR6F1Q8NGZ6 308 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 ZNF414Q96IQ9 312 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 FAM212BQ9NTI7 297 aaPredicted RBP11.07□□□□□ -0.64
COMMD4-223ENST00000568301 TMEM14BQ9NUH8 114 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 PKHD1P08F94 4074 aa11.07□□□□□ -0.64
COMMD4-223ENST00000568301 GPR31O00270 319 aa11.06□□□□□ -0.64
COMMD4-223ENST00000568301 MFAP4P55083 255 aa11.06□□□□□ -0.64
COMMD4-223ENST00000568301 FAM90A2PQ658T7 463 aa11.06□□□□□ -0.64
COMMD4-223ENST00000568301 OR5H2Q8NGV7 314 aa11.06□□□□□ -0.64
COMMD4-223ENST00000568301 CMTM3Q96MX0 182 aa11.06□□□□□ -0.64
COMMD4-223ENST00000568301 RARRES2Q99969 163 aa11.06□□□□□ -0.64
COMMD4-223ENST00000568301 TRAV14DV4A0A0A6YYC5 116 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 DBX1A6NMT0 343 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 C15orf61A6NNL5 157 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 I3L2K1 104 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 YIF1AO95070 293 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 PMP2P02689 132 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 CD5P06127 495 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 NXF2Q9GZY0 626 aaKnown RBP11.05□□□□□ -0.64
COMMD4-223ENST00000568301 MFFQ9GZY8 342 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 VCX3AQ9NNX9 186 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 FAT2Q9NYQ8 4349 aa11.05□□□□□ -0.64
COMMD4-223ENST00000568301 PAFAH1B2P68402 229 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 ZNF124Q15973 351 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 UBE2NLQ5JXB2 153 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 TMEM69Q5SWH9 247 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 LPCAT3Q6P1A2 487 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 LYSMD2Q8IV50 215 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 ZNF114Q8NC26 417 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 C11orf45Q8TAV5 145 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
COMMD4-223ENST00000568301 DNAH2Q9P225 4427 aa11.04□□□□□ -0.64
COMMD4-223ENST00000568301 IFNA4P05014 189 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 S100GP29377 79 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 PRSS3P35030 304 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 TFPI2P48307 235 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 TCTAP57738 103 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 TAS2R20P59543 309 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 MISP3Q96FF7 219 aa11.03□□□□□ -0.64
COMMD4-223ENST00000568301 SEC22AQ96IW7 307 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms