RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 NOTCH1P46531 2555 aa9.99□□□□□ -0.81
CNOT1-213ENST00000568158 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.98□□□□□ -0.81
CNOT1-213ENST00000568158 NAP1L6A6NFF2 107 aa9.98□□□□□ -0.81
CNOT1-213ENST00000568158 PLA2G10O15496 165 aa9.98□□□□□ -0.81
CNOT1-213ENST00000568158 ST8SIA3O43173 380 aa9.98□□□□□ -0.81
CNOT1-213ENST00000568158 KLF5Q13887 457 aaPredicted RBP9.98□□□□□ -0.81
CNOT1-213ENST00000568158 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
CNOT1-213ENST00000568158 THOC7Q6I9Y2 204 aaKnown RBP9.98□□□□□ -0.81
CNOT1-213ENST00000568158 FLVCR2Q9UPI3 526 aa9.98□□□□□ -0.81
CNOT1-213ENST00000568158 TMEM56-RWDD3S4R434 201 aa9.98□□□□□ -0.81
CNOT1-213ENST00000568158 IGHV3-21A0A0B4J1V1 117 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 MFSD2BA6NFX1 497 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 PPP5D1E7EU14 171 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 IFNA17P01571 189 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 PRCDQ00LT1 54 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 TMEM128Q5BJH2 165 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 CLEC19AQ6UXS0 136 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 LYZL2Q7Z4W2 148 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 HSD17B13Q7Z5P4 300 aaPredicted RBP9.97□□□□□ -0.81
CNOT1-213ENST00000568158 ZNF429Q86V71 674 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 OR2C3Q8N628 320 aa9.97□□□□□ -0.81
CNOT1-213ENST00000568158 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
CNOT1-213ENST00000568158 CENPXA8MT69 81 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 BMPR1BO00238 502 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 WIPF1O43516 503 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 NDUFB6O95139 128 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 OR2C1O95371 312 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
CNOT1-213ENST00000568158 ZP3P21754 424 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 BTCP35070 178 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 ERHP84090 104 aaKnown RBP9.96□□□□□ -0.82
CNOT1-213ENST00000568158 EGFEM1PQ0D2K5 195 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 RBMS2Q15434 407 aaKnown RBP9.96□□□□□ -0.82
CNOT1-213ENST00000568158 ACSM6Q6P461 480 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 LINC00299Q6ZSB3 139 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 FAM219AQ8IW50 185 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 SLC35G3Q8N808 338 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 IL22RA2Q969J5 263 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 EEF1AKMT3Q96AZ1 226 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 CCDC140Q96MF4 163 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 GPR61Q9BZJ8 451 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.96□□□□□ -0.82
CNOT1-213ENST00000568158 AURKAIP1Q9NWT8 199 aaPredicted RBP9.96□□□□□ -0.82
CNOT1-213ENST00000568158 CACNG5Q9UF02 275 aa9.96□□□□□ -0.82
CNOT1-213ENST00000568158 SAP30O75446 220 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 SFT2D2O95562 160 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 CLEC3BP05452 202 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 ANXA3P12429 323 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 VAMP1P23763 118 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 PPP1R1AQ13522 171 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 RPEL1Q2QD12 228 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 ANKRD55Q3KP44 614 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 LGI3Q8N145 548 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 CENPSQ8N2Z9 138 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 S100ZQ8WXG8 99 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 C7orf50Q9BRJ6 194 aaKnown RBP9.95□□□□□ -0.82
CNOT1-213ENST00000568158 PDCD10Q9BUL8 212 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 PLEKHA3Q9HB20 300 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 ZC4H2Q9NQZ6 224 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 PTTG2Q9NZH5 202 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 THYN1Q9P016 225 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 DNAH3Q8TD57 4116 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 MEGF8Q7Z7M0 2845 aa9.95□□□□□ -0.82
CNOT1-213ENST00000568158 TRBV7-1A0A0A6YYK4 115 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 WI2-2373I1.2A0A1W2PRP0 233 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 LYRM1O43325 122 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 NXPH3O95157 252 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 ARL3P36405 182 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 TATDN3Q17R31 274 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 PDLIM3Q53GG5 364 aaPredicted RBP9.94□□□□□ -0.82
CNOT1-213ENST00000568158 IL34Q6ZMJ4 242 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 ZNF502Q8TBZ5 544 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 SCARB1Q8WTV0 552 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 CXorf58Q96LI9 332 aa9.94□□□□□ -0.82
CNOT1-213ENST00000568158 A0A0B4J2A0 478 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 LOC100996750A0A140TA64 210 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 C9orf170A2RU37 121 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 K7EIM0 57 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 CYB5BO43169 146 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 GGCTO75223 188 aaKnown RBP9.93□□□□□ -0.82
CNOT1-213ENST00000568158 IGHV3-48P01763 117 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 SPCS3P61009 180 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 NMSQ5H8A3 153 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 OR1L6Q8NGR2 347 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 OR1P1Q8NH06 330 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 VN1R17PQ8TDU5 208 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 MISP3Q96FF7 219 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 OR4C12Q96R67 309 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 CCDC32Q9BV29 185 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 ELOVL1Q9BW60 279 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 KRTAP4-6Q9BYQ5 205 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 SHPKQ9UHJ6 478 aa9.93□□□□□ -0.82
CNOT1-213ENST00000568158 IGHV3-35A0A0C4DH35 117 aa9.92□□□□□ -0.82
CNOT1-213ENST00000568158 INS-IGF2F8WCM5 200 aa9.92□□□□□ -0.82
CNOT1-213ENST00000568158 K7EIL1 84 aa9.92□□□□□ -0.82
CNOT1-213ENST00000568158 CSN3P07498 182 aa9.92□□□□□ -0.82
CNOT1-213ENST00000568158 HOXB5P09067 269 aa9.92□□□□□ -0.82
CNOT1-213ENST00000568158 SULT1A3P0DMM9 295 aa9.92□□□□□ -0.82
CNOT1-213ENST00000568158 SULT1A4P0DMN0 295 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms