RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CENPSQ8N2Z9 138 aa9.54□□□□□ -0.88
RNF40-211ENST00000567365 OR2C3Q8N628 320 aa9.54□□□□□ -0.88
RNF40-211ENST00000567365 SLC35G3Q8N808 338 aa9.54□□□□□ -0.88
RNF40-211ENST00000567365 ZNF114Q8NC26 417 aa9.54□□□□□ -0.88
RNF40-211ENST00000567365 RRNAD1Q96FB5 475 aaKnown RBP9.54□□□□□ -0.88
RNF40-211ENST00000567365 SHPKQ9UHJ6 478 aa9.54□□□□□ -0.88
RNF40-211ENST00000567365 FLVCR2Q9UPI3 526 aa9.54□□□□□ -0.88
RNF40-211ENST00000567365 F11RQ9Y624 299 aaKnown RBP9.54□□□□□ -0.88
RNF40-211ENST00000567365 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.53□□□□□ -0.88
RNF40-211ENST00000567365 CENPXA8MT69 81 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 SFT2D2O95562 160 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 DUS4LO95620 317 aaKnown RBP9.53□□□□□ -0.88
RNF40-211ENST00000567365 SRPXP78539 464 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 ZNF846Q147U1 533 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 LYZL2Q7Z4W2 148 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 OR52E5Q8NH55 327 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 DLX4Q92988 240 aaPredicted RBP9.53□□□□□ -0.88
RNF40-211ENST00000567365 CCDC140Q96MF4 163 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 WDR12Q9GZL7 423 aaKnown RBP9.53□□□□□ -0.88
RNF40-211ENST00000567365 RANGRFQ9HD47 186 aaPredicted RBP9.53□□□□□ -0.88
RNF40-211ENST00000567365 FBXL7Q9UJT9 491 aa9.53□□□□□ -0.88
RNF40-211ENST00000567365 DUXBA0A1W2PPF3 345 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 MFSD2BA6NFX1 497 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 BMPR1BO00238 502 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 PITX3O75364 302 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 UPK1BO75841 260 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 DHFRP00374 187 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 ANXA3P12429 323 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 HOXD3P31249 432 aaPredicted RBP9.52□□□□□ -0.89
RNF40-211ENST00000567365 SLURP1P55000 103 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 ATP5G2Q06055 141 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 ASAH1Q13510 395 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 EXOSC2Q13868 293 aaKnown RBP9.52□□□□□ -0.89
RNF40-211ENST00000567365 BSXQ3C1V8 233 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 LGI3Q8N145 548 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 OR1P1Q8NH06 330 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 DCUN1D4Q92564 292 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 DPF1Q92782 380 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 HINT2Q9BX68 163 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.52□□□□□ -0.89
RNF40-211ENST00000567365 PEF1Q9UBV8 284 aaKnown RBP9.52□□□□□ -0.89
RNF40-211ENST00000567365 CACNG5Q9UF02 275 aa9.52□□□□□ -0.89
RNF40-211ENST00000567365 C9orf170A2RU37 121 aa9.51□□□□□ -0.89
RNF40-211ENST00000567365 F8W735 103 aaPredicted RBP9.51□□□□□ -0.89
RNF40-211ENST00000567365 K7EIM0 57 aa9.51□□□□□ -0.89
RNF40-211ENST00000567365 ANXA7P20073 488 aaKnown RBP9.51□□□□□ -0.89
RNF40-211ENST00000567365 MECP2P51608 486 aaKnown RBP9.51□□□□□ -0.89
RNF40-211ENST00000567365 SPCS3P61009 180 aa9.51□□□□□ -0.89
RNF40-211ENST00000567365 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
RNF40-211ENST00000567365 DHRS2Q13268 280 aa9.51□□□□□ -0.89
RNF40-211ENST00000567365 KLF5Q13887 457 aaPredicted RBP9.51□□□□□ -0.89
RNF40-211ENST00000567365 C1QL4Q86Z23 238 aa9.51□□□□□ -0.89
RNF40-211ENST00000567365 ZNF502Q8TBZ5 544 aa9.51□□□□□ -0.89
RNF40-211ENST00000567365 MCRIP2Q9BUT9 160 aaKnown RBP9.51□□□□□ -0.89
RNF40-211ENST00000567365 ANKRD34BA5PLL1 514 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 TCRBP04435 133 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 OR4E1P0C645 316 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 SULT1A3P0DMM9 295 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 SULT1A4P0DMN0 295 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
RNF40-211ENST00000567365 DEFA4P12838 97 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 ZP3P21754 424 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 VAMP1P23763 118 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 SPINK9Q5DT21 86 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 FAM209BQ5JX69 171 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 OR1L6Q8NGR2 347 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 VN1R17PQ8TDU5 208 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 ZNF414Q96IQ9 312 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 ATP6V0BQ99437 205 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 C20orf85Q9H1P6 137 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 PLEKHA3Q9HB20 300 aa9.5□□□□□ -0.89
RNF40-211ENST00000567365 TGP01266 2768 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 PIGBOS1A0A0B4J2F0 54 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 A0A1B0GU03 582 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 I3L2K1 104 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 OVOL1O14753 267 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 IFNA17P01571 189 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 SLC25A6P12236 298 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 KRTAP10-11P60412 298 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 SMCO1Q147U7 214 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 IL34Q6ZMJ4 242 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 LYG2Q86SG7 212 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 RNASE11Q8TAA1 199 aaKnown RBP9.49□□□□□ -0.89
RNF40-211ENST00000567365 TMEM170AQ8WVE7 144 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 CXorf58Q96LI9 332 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 THYN1Q9P016 225 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 HSPB7Q9UBY9 170 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 TMED3Q9Y3Q3 217 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 S4R3C0 116 aa9.49□□□□□ -0.89
RNF40-211ENST00000567365 TRBV7-1A0A0A6YYK4 115 aa9.48□□□□□ -0.89
RNF40-211ENST00000567365 SEC14L6B5MCN3 397 aa9.48□□□□□ -0.89
RNF40-211ENST00000567365 PPP5D1E7EU14 171 aa9.48□□□□□ -0.89
RNF40-211ENST00000567365 IGHV3-23P01764 117 aa9.48□□□□□ -0.89
RNF40-211ENST00000567365 HLA-AP01891 365 aaKnown RBP9.48□□□□□ -0.89
RNF40-211ENST00000567365 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
RNF40-211ENST00000567365 RAB25P57735 213 aa9.48□□□□□ -0.89
RNF40-211ENST00000567365 ERHP84090 104 aaKnown RBP9.48□□□□□ -0.89
RNF40-211ENST00000567365 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms