RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 THYN1Q9P016 225 aa7.67□□□□□ -1.18
GTF3C1-206ENST00000566779 PRNDQ9UKY0 176 aa7.67□□□□□ -1.18
GTF3C1-206ENST00000566779 DBX1A6NMT0 343 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 SCAF4O95104 1147 aaKnown RBP7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 RAB3DO95716 219 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 CLEC3BP05452 202 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 IL18Q14116 193 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 IZUMO4Q1ZYL8 232 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 TRIM16LQ309B1 348 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 ZNF585BQ52M93 769 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 FAM209BQ5JX69 171 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 PLET1Q6UQ28 207 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 BTNL8Q6UX41 500 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 OR4D10Q8NGI6 311 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 PINX1Q96BK5 328 aaKnown RBP7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 C20orf24Q9BUV8 137 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 RETNQ9HD89 108 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 SLC2A8Q9NY64 477 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 COPZ2Q9P299 210 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 DMRT1Q9Y5R6 373 aa7.66□□□□□ -1.18
GTF3C1-206ENST00000566779 STAB2Q8WWQ8 2551 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 TRBV7-1A0A0A6YYK4 115 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 CCDC160A6NGH7 325 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 C15orf61A6NNL5 157 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 CTDSP2O14595 271 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 ZNF207O43670 478 aaKnown RBP7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 TPPPO94811 219 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 IGHV3-48P01763 117 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 CD7P09564 240 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 ALDH3B2P48448 385 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 PIGPP57054 158 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 TAS2R19P59542 299 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 THOC7Q6I9Y2 204 aaKnown RBP7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 UNQ9165/PRO28630Q6UXU0 137 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 ADAMTSL5Q6ZMM2 481 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 SLC35G3Q8N808 338 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 ZNF502Q8TBZ5 544 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 DIRAS2Q96HU8 199 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 TMEM56Q96MV1 263 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 ABHD1Q96SE0 405 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 TSC22D3Q99576 134 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 NEURL2Q9BR09 285 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 MIXL1Q9H2W2 232 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 PALMDQ9NP74 551 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 C19orf73Q9NVV2 129 aa7.65□□□□□ -1.18
GTF3C1-206ENST00000566779 TENM3Q9P273 2699 aa7.65□□□□□ -1.19
GTF3C1-206ENST00000566779 TMEM213A2RRL7 107 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 TGOLN2O43493 480 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 CBLN1P23435 193 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 MFAP2P55001 183 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 DEFB114Q30KQ6 69 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 SP6Q3SY56 376 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 ZNF57Q68EA5 555 aaPredicted RBP7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 STEAP1BQ6NZ63 245 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 HSD17B13Q7Z5P4 300 aaPredicted RBP7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 TMEM61Q8N0U2 210 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 DEFB125Q8N687 156 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 CCDC71LQ8N9Z2 235 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 UXS1Q8NBZ7 420 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 OR13C8Q8NGS7 320 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 OR5B3Q8NH48 314 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 MARCH1Q8TCQ1 289 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 RAB2BQ8WUD1 216 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 TP53RKQ96S44 253 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 FAM110AQ9BQ89 295 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 PDCD10Q9BUL8 212 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 SRD5A3Q9H8P0 318 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 NDUFA4L2Q9NRX3 87 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 C21orf62Q9NYP8 219 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 MTFP1Q9UDX5 166 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 MLXQ9UH92 298 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 F11RQ9Y624 299 aaKnown RBP7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 DNAH9Q9NYC9 4486 aa7.64□□□□□ -1.19
GTF3C1-206ENST00000566779 TEX13DA0A0J9YY54 714 aaPredicted RBP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 C3orf85A0A1B0GTC6 90 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 YIF1AO95070 293 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 IFNA17P01571 189 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 IGKV1-39P01597 117 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 IGKV1D-39P04432 117 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 PTBP1P26599 531 aaKnown RBP eCLIP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 HOXA1P49639 335 aaPredicted RBP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 UCP3P55916 312 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 ZFAND6Q6FIF0 208 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 RBPMS2Q6ZRY4 209 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 SLC16A13Q7RTY0 426 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 GPHB5Q86YW7 130 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 ARRDC1Q8N5I2 433 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 OR52B4Q8NGK2 314 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 OR2K2Q8NGT1 345 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 C15orf40Q8WUR7 153 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 SEC22AQ96IW7 307 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 SRSF8Q9BRL6 282 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 FKBP11Q9NYL4 201 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 SIGLEC8Q9NYZ4 499 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 TECRQ9NZ01 308 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 CCDC59Q9P031 241 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 C14orf166Q9Y224 244 aaKnown RBP7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 UFC1Q9Y3C8 167 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 CEPT1Q9Y6K0 416 aa7.63□□□□□ -1.19
GTF3C1-206ENST00000566779 IGHV3-49A0A0A0MS15 119 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms