RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 FHL3Q13643 280 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 TATDN3Q17R31 274 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 PDLIM3Q53GG5 364 aaPredicted RBP9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 C18orf65Q6ZTR6 163 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 SLC35G3Q8N808 338 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 LINC00482Q8N8I6 264 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 OR1P1Q8NH06 330 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 COQ8AQ8NI60 647 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 LHFPL5Q8TAF8 219 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 CASTOR1Q8WTX7 329 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 GPR146Q96CH1 333 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 ATP6V0BQ99437 205 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 PEF1Q9UBV8 284 aaKnown RBP9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 TMED3Q9Y3Q3 217 aa9.75□□□□□ -0.85
SHCBP1-204ENST00000565887 ST8SIA3O43173 380 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 IGHV3-11P01762 117 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 OR4E1P0C645 316 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 WT1-ASQ06250 92 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 PPP1R1AQ13522 171 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 SMCO1Q147U7 214 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 C15orf32Q32M92 178 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 C4orf46Q504U0 113 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 SLC25A24Q6NUK1 477 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 NOXA1Q86UR1 476 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 OR2C3Q8N628 320 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 ZNF114Q8NC26 417 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 VN1R17PQ8TDU5 208 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 EEF1AKMT3Q96AZ1 226 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 FANCD2OSQ96PS1 177 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 OR5B12Q96R08 314 aa9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 GAR1Q9NY12 217 aaKnown RBP9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 F11RQ9Y624 299 aaKnown RBP9.74□□□□□ -0.85
SHCBP1-204ENST00000565887 IGLV11-55A0A075B6I3 123 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 DBX1A6NMT0 343 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 CORTO00230 105 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 OR2J3O76001 311 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 LY86O95711 162 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 IFNA21P01568 189 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 HLA-AP01891 365 aaKnown RBP9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 ATP5IP56385 69 aaPredicted RBP9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 NMSQ5H8A3 153 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 Q6ZRM9 215 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 LYZL2Q7Z4W2 148 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 LYG2Q86SG7 212 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 CACNG5Q9UF02 275 aa9.73□□□□□ -0.85
SHCBP1-204ENST00000565887 FAM90A26D6RGX4 464 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 PRH1P02810 166 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 REG1AP05451 166 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 H2AFB2P0C5Z0 115 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 INSL3P51460 131 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 DHRS2Q13268 280 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 EXOSC2Q13868 293 aaKnown RBP9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 IZUMO4Q1ZYL8 232 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 DEFB136Q30KP8 78 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 DUSP18Q8NEJ0 188 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 ENKURQ8TC29 256 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 C20orf85Q9H1P6 137 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 HIPK2Q9H2X6 1198 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 FLVCR2Q9UPI3 526 aa9.72□□□□□ -0.85
SHCBP1-204ENST00000565887 A0A0G2JRQ6 117 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 ANKRD34BA5PLL1 514 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 OVOL1O14753 267 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 MED6O75586 246 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 NDUFB8O95169 186 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 HTR2BP41595 481 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 ANKRD55Q3KP44 614 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 C9orf66Q5T8R8 295 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 OR1S1Q8NH92 325 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 MITD1Q8WV92 249 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 DUX3Q96PT4 197 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 TXN2Q99757 166 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 ELOVL1Q9BW60 279 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 NUDT15Q9NV35 164 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 TBC1D24Q9ULP9 559 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 U3KQ87 197 aa9.71□□□□□ -0.86
SHCBP1-204ENST00000565887 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 A0A087WW49 117 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 CEBPZOSA8MTT3 80 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 GGCTO75223 188 aaKnown RBP9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 ANXA7P20073 488 aaKnown RBP9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 TNFRSF9Q07011 255 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 KLF5Q13887 457 aaPredicted RBP9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 RPEL1Q2QD12 228 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 SPSB3Q6PJ21 355 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 HEYLQ9NQ87 328 aaPredicted RBP9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 NOTCH3Q9UM47 2321 aa9.7□□□□□ -0.86
SHCBP1-204ENST00000565887 TRAV6A0A075B6T7 132 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 WIPF1O43516 503 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 PITX3O75364 302 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 IL5P05113 134 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 CLEC3BP05452 202 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 HOXB5P09067 269 aa9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 HOXD3P31249 432 aaPredicted RBP9.69□□□□□ -0.86
SHCBP1-204ENST00000565887 MFAP4P55083 255 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms