RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 IL34Q6ZMJ4 242 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 SGPP2Q8IWX5 399 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 S100ZQ8WXG8 99 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 GALNT14Q96FL9 552 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 C7orf50Q9BRJ6 194 aaKnown RBP10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 TMEM14BQ9NUH8 114 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 PEMTQ9UBM1 199 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 U3KQK5 164 aa10.38□□□□□ -0.75
VPS9D1-204ENST00000565023 COL7A1Q02388 2944 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 TEX50A0A1B0GTY4 177 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 IZUMO1RA6ND01 250 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 MFSD2BA6NFX1 497 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 C15orf61A6NNL5 157 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 ATG12O94817 140 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 CRYGCP07315 174 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 NHLRC4P0CG21 123 aaPredicted RBP10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 ARL3P36405 182 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 DHODHQ02127 395 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 TRIM16LQ309B1 348 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 THOC7Q6I9Y2 204 aaKnown RBP10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 H2BFWTQ7Z2G1 175 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 SBSPONQ8IVN8 264 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 DYNLRB2Q8TF09 96 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 EEF1AKMT3Q96AZ1 226 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 CCDC32Q9BV29 185 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 QTRT1Q9BXR0 403 aaKnown RBP10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 FKBP11Q9NYL4 201 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 PRNDQ9UKY0 176 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 KCNIP3Q9Y2W7 256 aa10.37□□□□□ -0.75
VPS9D1-204ENST00000565023 IGHV3-21A0A0B4J1V1 117 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 LINC00854A0A1B0GVQ3 168 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 IGLC7A0M8Q6 106 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 DBX1A6NMT0 343 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 GGCTO75223 188 aaKnown RBP10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 TRAPPC2P0DI81 140 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 TRAPPC2BP0DI82 140 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 OR13C7P0DN81 318 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 HIST1H1BP16401 226 aaKnown RBP10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 BTCP35070 178 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 MECP2P51608 486 aaKnown RBP10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 CCR6P51684 374 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 AKR1C2P52895 323 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 SUPT4H1P63272 117 aaKnown RBP10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 RBMS2Q15434 407 aaKnown RBP10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 KLK9Q2XQG4 91 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 OR5B3Q8NH48 314 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 LHFPL5Q8TAF8 219 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 RBPMSQ93062 196 aaKnown RBP10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 CCDC140Q96MF4 163 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 TMEM56Q96MV1 263 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 NDUFA4L2Q9NRX3 87 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 KLK9Q9UKQ9 250 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 OR51B2Q9Y5P1 312 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 TMEM56-RWDD3S4R434 201 aa10.36□□□□□ -0.75
VPS9D1-204ENST00000565023 IGLV11-55A0A075B6I3 123 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 IGHV3-35A0A0C4DH35 117 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 ZNF320A2RRD8 509 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 CENPXA8MT69 81 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 PLA2G10O15496 165 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 NDUFB6O95139 128 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 IGHV4-30-4P0DP06 118 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 AKR1C4P17516 323 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 GPR183P32249 361 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 TMEM187Q14656 261 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 IZUMO4Q1ZYL8 232 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 TMEM128Q5BJH2 165 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 LCN12Q6JVE5 192 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 SLC25A24Q6NUK1 477 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 HSD17B13Q7Z5P4 300 aaPredicted RBP10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 TMED4Q7Z7H5 227 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 SELENOHQ8IZQ5 122 aaKnown RBP10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 OR4A16Q8NH70 328 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 CACNG8Q8WXS5 425 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 IL22RA2Q969J5 263 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 RRNAD1Q96FB5 475 aaKnown RBP10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 RYR2Q92736 4967 aa10.35□□□□□ -0.75
VPS9D1-204ENST00000565023 A0A0B4J293 547 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 A0A0G2JRQ6 117 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 HSPE1P61604 102 aaKnown RBP10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 WT1-ASQ06250 92 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 CD300EQ496F6 205 aaPredicted RBP10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 FAM219AQ8IW50 185 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 Q8N1Y9 231 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 LSM10Q969L4 123 aaKnown RBP10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 WDR12Q9GZL7 423 aaKnown RBP10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 DMRT1Q9Y5R6 373 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 SACSQ9NZJ4 4579 aa10.34□□□□□ -0.75
VPS9D1-204ENST00000565023 C2orf70A6NJV1 201 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 CLEC3BP05452 202 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 ANXA3P12429 323 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 ZNF846Q147U1 533 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 GUCA2BQ16661 112 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 AARDQ4LEZ3 155 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 TMEM268Q5VZI3 342 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 GTSCR1Q86UQ5 136 aa10.33□□□□□ -0.76
VPS9D1-204ENST00000565023 CENPSQ8N2Z9 138 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms