RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SMIM8Q96KF7 97 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 HSPB9Q9BQS6 159 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 MFFQ9GZY8 342 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 ZC4H2Q9NQZ6 224 aa8.77□□□□□ -1.01
SF3B3-205ENST00000564899 LYRM2Q9NU23 88 aaPredicted RBP8.77□□□□□ -1.01
SF3B3-205ENST00000564899 MSGN1A6NI15 193 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 TEX22C9J3V5 150 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 INS-IGF2F8WCM5 200 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 IFNA10P01566 189 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 AMY1AP04745 511 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 HKR1P10072 659 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 CXCL2P19875 107 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 RPL12P30050 165 aaKnown RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 RPP30P78346 268 aaKnown RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 ERHP84090 104 aaKnown RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 C9orf152Q5JTZ5 239 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 ACOT7LQ6ZUV0 252 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 HSD17B13Q7Z5P4 300 aaPredicted RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 C9orf62Q8N4C0 152 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 TMEM252Q8N6L7 170 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 SLC24A4Q8NFF2 622 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 AQP10Q96PS8 301 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 DUX5Q96PT3 197 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 OR4C12Q96R67 309 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 FAM103A1Q9BTL3 118 aaKnown RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 SLC25A31Q9H0C2 315 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 PARP11Q9NR21 331 aa8.76□□□□□ -1.01
SF3B3-205ENST00000564899 PAIP2BQ9ULR5 123 aaKnown RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 STRAPQ9Y3F4 350 aaKnown RBP8.76□□□□□ -1.01
SF3B3-205ENST00000564899 IGLC7A0M8Q6 106 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 IGSF23A1L1A6 192 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 RNF222A6NCQ9 220 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 DNAJC9-AS1A6NH13 148 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 APELAP0DMC3 54 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 OR13C7P0DN81 318 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 AREGP15514 252 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 NPY1RP25929 384 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 AP2S1P53680 142 aaPredicted RBP8.75□□□□□ -1.01
SF3B3-205ENST00000564899 DEFA6Q01524 100 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 EWSR1Q01844 656 aaKnown RBP eCLIP8.75□□□□□ -1.01
SF3B3-205ENST00000564899 WT1-ASQ06250 92 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 TMEM267Q0VDI3 215 aaPredicted RBP8.75□□□□□ -1.01
SF3B3-205ENST00000564899 OR2F1Q13607 317 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 STX12Q86Y82 276 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 C3orf56Q8N813 242 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 ZNF418Q8TF45 676 aaPredicted RBP8.75□□□□□ -1.01
SF3B3-205ENST00000564899 HSPB11Q9Y547 144 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 U3KQ87 197 aa8.75□□□□□ -1.01
SF3B3-205ENST00000564899 TMEM89A2RUT3 159 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 C15orf62A8K5M9 175 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 ATP6V0E1O15342 81 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 CST7O76096 145 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 REG1AP05451 166 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 OR8U8P0C7N1 319 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 METTL15P1P0C7V9 234 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 SNCAP37840 140 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 HTR2BP41595 481 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 BLCAPP62952 87 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 BAXQ07812 192 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 ZNF345Q14585 488 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 LGALSLQ3ZCW2 172 aaPredicted RBP8.74□□□□□ -1.01
SF3B3-205ENST00000564899 TMEM14EPQ6UXP3 125 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 KCNRGQ8N5I3 272 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 SGMS2Q8NHU3 365 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 NPFFR1Q9GZQ6 430 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 FBXO7Q9Y3I1 522 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 TNCP24821 2201 aa8.74□□□□□ -1.01
SF3B3-205ENST00000564899 A0A0D9SG52 128 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 RNASE2P10153 161 aaKnown RBP8.73□□□□□ -1.01
SF3B3-205ENST00000564899 EGR2P11161 476 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-205ENST00000564899 SULT1A1P50225 295 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 SUB1P53999 127 aaKnown RBP eCLIP8.73□□□□□ -1.012e-9■■■■■ 47.3
SF3B3-205ENST00000564899 ATP5IP56385 69 aaPredicted RBP8.73□□□□□ -1.01
SF3B3-205ENST00000564899 RAB11AP62491 216 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 ECSCRQ19T08 205 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 BSXQ3C1V8 233 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 LAMTOR1Q6IAA8 161 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 TMUB2Q71RG4 321 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 SLC35E3Q7Z769 313 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 TMEM217Q8N7C4 229 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 LFNGQ8NES3 379 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 P2RX4Q99571 388 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 ARL6Q9H0F7 186 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 ESM1Q9NQ30 184 aa8.73□□□□□ -1.01
SF3B3-205ENST00000564899 KANTRA0A1W2PQU2 76 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 LINC01548A6NM66 108 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 NPIPB5A8MRT5 1133 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 CLDN34H7C241 214 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 TRIM77I1YAP6 450 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 BCL2L11O43521 198 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 SCAF4O95104 1147 aaKnown RBP8.72□□□□□ -1.01
SF3B3-205ENST00000564899 IGHG2P01859 326 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 IFNA4P05014 189 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 CTRB1P17538 263 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 C4BPBP20851 252 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 S100A11P31949 105 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 HBG1P69891 147 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 HBG2P69892 147 aa8.72□□□□□ -1.01
SF3B3-205ENST00000564899 NHLH2Q02577 135 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms