RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 MBD3L4A6NDZ8 208 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 MBD3L3A6NE82 208 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 MBD3L5A6NJ08 208 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 CRYBB3P26998 211 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 LINC00310P59036 64 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 PAFAH1B2P68402 229 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 Q6ZWC4 215 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 MBD3L2Q8NHZ7 208 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 NABP2Q9BQ15 211 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 MRPL18Q9H0U6 180 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 RNF7Q9UBF6 113 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 C9JCJ5 164 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 SELENOTP62341 195 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 FAM216BQ8N7L0 139 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 DEFB124Q8NES8 71 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 FAM222BQ8WU58 562 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 TANC2Q9HCD6 1990 aa12.65□□□□□ -0.38
GTF3C1-205ENST00000564747 CT45A6P0DMU7 189 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 CT45A5P0DMU8 189 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 CT45A7P0DMV0 189 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 IER3P46695 156 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 LGALS4P56470 323 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 C22orf34Q6ZV56 151 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 OR1L6Q8NGR2 347 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 GAFA1Q96PS6 74 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 NCOR1P1Q9H4R4 102 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 PLEKHA3Q9HB20 300 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 DCAF16Q9NXF7 216 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 IGLV3-9A0A075B6K5 115 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 HELTA6NFD8 242 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 A8MXE2 369 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 CRISP2P16562 243 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 POU2AF1Q16633 256 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 STUMQ69YW2 141 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 MRPL52Q86TS9 123 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 MMD2Q8IY49 270 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 ZNF503Q96F45 646 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 ADTRPQ96IZ2 230 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 C20orf144Q9BQM9 153 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 PRNDQ9UKY0 176 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 V9GYV3 84 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 UPK2O00526 184 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 FCN1O00602 326 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 SERF1AO75920 110 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 AREGP15514 252 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 TMEM183BQ1AE95 376 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 TDRG1Q3Y452 100 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 CENPWQ5EE01 88 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 TPTE2P1Q5T6R2 138 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 RND1Q92730 232 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 MIEN1Q9BRT3 115 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 RAB9BQ9NP90 201 aa12.64□□□□□ -0.39
GTF3C1-205ENST00000564747 TEX50A0A1B0GTY4 177 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 F2Z2F3 143 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 DLEU1O43261 78 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 SPINK4O60575 86 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 FTH1P19P0C7X4 201 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 IRF2P14316 349 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 GATA4P43694 442 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 RANP62826 216 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 TNFAIP6P98066 277 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 PRCDQ00LT1 54 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 RPEL1Q2QD12 228 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 PQLC2Q6ZP29 291 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 DOLPP1Q86YN1 238 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 OR8I2Q8N0Y5 310 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 CORO2AQ92828 525 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 PAM16Q9Y3D7 125 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 GOLT1BQ9Y3E0 138 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 LY96Q9Y6Y9 160 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 ARFGEF3Q5TH69 2177 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 RAI1Q7Z5J4 1906 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 A6NNC1 897 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 OR7C2O60412 319 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 IGHV1-46P01743 117 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 OR10J4P0C629 311 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 GNG4P50150 75 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 OR10W1Q8NGF6 305 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 RNASE7Q9H1E1 156 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 SLC35D1Q9NTN3 355 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 FAM215AQ9Y5M1 114 aa12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 MAP1BP46821 2468 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-205ENST00000564747 OR5AU1Q8NGC0 362 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 OR9G1Q8NH87 305 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 VAMP8Q9BV40 100 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 SLC25A10Q9UBX3 287 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 IL19Q9UHD0 177 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 TRAV9-1A0A075B6T8 112 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 SNURFLB1AK76 121 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 FNDC10F2Z333 226 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 SLC25A48Q6ZT89 311 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 BAGE3Q86Y29 109 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 BAGE2Q86Y30 109 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 ST6GALNAC3Q8NDV1 305 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 VN1R17PQ8TDU5 208 aa12.62□□□□□ -0.39
GTF3C1-205ENST00000564747 RBM14Q96PK6 669 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms