RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PMCHL1Q16048 86 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 C17orf58Q2M2W7 97 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 DEFB109BQ30KR1 87 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 RPL39P5Q59GN2 51 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 CT45A1Q5HYN5 189 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 IBA57Q5T440 356 aaKnown RBP6.27□□□□□ -1.41
ATXN3-249ENST00000564606 GFI1BQ5VTD9 330 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 ZNF833PQ6ZTB9 187 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 TPRX1Q8N7U7 411 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 RBMXL3Q8N7X1 1067 aaKnown RBP6.27□□□□□ -1.41
ATXN3-249ENST00000564606 CT45A3Q8NHU0 189 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 TMEM167AQ8TBQ9 72 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 FAM57AQ8TBR7 257 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 SSMEM1Q8WWF3 244 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 HARBI1Q96MB7 349 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 RNF5Q99942 180 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 SRSF8Q9BRL6 282 aaKnown RBP6.27□□□□□ -1.41
ATXN3-249ENST00000564606 VAMP8Q9BV40 100 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 GCM1Q9NP62 436 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 MRPL27Q9P0M9 148 aaKnown RBP6.27□□□□□ -1.41
ATXN3-249ENST00000564606 NAT8BQ9UHF3 227 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 AMMECR1Q9Y4X0 333 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-249ENST00000564606 COL27A1Q8IZC6 1860 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-249ENST00000564606 RTTNQ86VV8 2226 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 DOCK10Q96BY6 2186 aa6.27□□□□□ -1.41
ATXN3-249ENST00000564606 PPIAL4EA0A075B759 164 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 FAM231BA6NCW3 169 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 IZUMO1RA6ND01 250 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 SNURFLB1AK76 121 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 PPIAL4DF5H284 164 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 C16orf97H3BN30 126 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 K7EQM0 130 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 CT45A6P0DMU7 189 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 CT45A5P0DMU8 189 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 CT45A7P0DMV0 189 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 PPIAL4FP0DN26 164 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 NDUFB7P17568 137 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 PMCHP20382 165 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 CEACAM8P31997 349 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-249ENST00000564606 UBE2L3P68036 154 aaKnown RBP6.26□□□□□ -1.41
ATXN3-249ENST00000564606 RTP5Q14D33 572 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 SPINK9Q5DT21 86 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 C10orf113Q5VZT2 155 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 Q6ZS92 163 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 DMRTC2Q8IXT2 367 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-249ENST00000564606 Q8N7P7 452 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 TEX45Q8NA69 505 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 ZNRF1Q8ND25 227 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 ZNF439Q8NDP4 499 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 WIPF2Q8TF74 440 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-249ENST00000564606 GRAMD2BQ96HH9 432 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 GAFA1Q96PS6 74 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 C20orf144Q9BQM9 153 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 SLC25A33Q9BSK2 321 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 ELOVL1Q9BW60 279 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 ASCL3Q9NQ33 180 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 FZR1Q9UM11 496 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 WASHC3Q9Y3C0 194 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 PPIAL4AQ9Y536 164 aa6.26□□□□□ -1.41
ATXN3-249ENST00000564606 KIR2DL5BA0A0G2JN68 375 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 KIR2DL5BA0A0G2JPC4 375 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 IGHV3-64DA0A0J9YX35 117 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 TEX50A0A1B0GTY4 177 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 TCRBV4S1A1TA0A5B7 111 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 C17orf100A8MU93 164 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 C22orf46C9J442 243 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 FSTL3O95633 263 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 IGHV1-46P01743 117 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 RBP4P02753 201 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 C1QTNF9P0C862 333 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 IGFBP2P18065 325 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 EGR1P18146 543 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 NPPCP23582 126 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 CD40P25942 277 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 ADMP35318 185 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 RPS16P62249 146 aaKnown RBP6.25□□□□□ -1.41
ATXN3-249ENST00000564606 SUMO1P63165 101 aaKnown RBP6.25□□□□□ -1.41
ATXN3-249ENST00000564606 PAX2Q02962 417 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 CENPWQ5EE01 88 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 CT83Q5H943 113 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 KIR2DL5AQ8N109 375 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 ZNF664Q8N3J9 261 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 OR5AN1Q8NGI8 311 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 OR9G1Q8NH87 305 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 ZNF596Q8TC21 504 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 DAZAP1Q96EP5 407 aaKnown RBP6.25□□□□□ -1.41
ATXN3-249ENST00000564606 KCNS1Q96KK3 526 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 MIEN1Q9BRT3 115 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 PAXXQ9BUH6 204 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 PRO1933Q9H354 126 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 SAP30LQ9HAJ7 183 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 PARD6AQ9NPB6 346 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 KAAG1Q9UBP8 84 aa6.25□□□□□ -1.41
ATXN3-249ENST00000564606 IGHV3OR15-7A0A075B7D8 119 aa6.24□□□□□ -1.41
ATXN3-249ENST00000564606 A0A1B0GW15 77 aa6.24□□□□□ -1.41
ATXN3-249ENST00000564606 SMIM27A0A1W2PRY6 76 aa6.24□□□□□ -1.41
ATXN3-249ENST00000564606 FBLL1A6NHQ2 334 aaKnown RBP6.24□□□□□ -1.41
ATXN3-249ENST00000564606 A8MWL6 223 aa6.24□□□□□ -1.41
ATXN3-249ENST00000564606 ZNHIT1O43257 154 aa6.24□□□□□ -1.41
ATXN3-249ENST00000564606 ZNF253O75346 499 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms