RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RALGAPA2Q2PPJ7 1873 aa0.8□□□□□ -2.28
HMGB1P33-201ENST00000563485 PTPRSQ13332 1948 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 FLG2Q5D862 2391 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 DISP1Q96F81 1524 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 IGLV3-9A0A075B6K5 115 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRAV38-1A0A0B4J264 116 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRAV41A0A0B4J266 112 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 IGHV1-18A0A0C4DH31 117 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRBV10-2A0A0K0K1G8 114 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 EXOC1LA0A1B0GW35 172 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR51F1A6NGY5 319 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 FAM159BA6NKW6 160 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 FABP5P3A8MUU1 101 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 H7C2G1 150 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 I3L521 148 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 J3QRK9 145 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 TXNDC9O14530 226 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 PDE6DO43924 150 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 CREBL2O60519 120 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 IGKV1-5P01602 117 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 C1QBP02746 253 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 SERPINE1P05121 402 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 SERPINA7P05543 415 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 C8GP07360 202 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 LGALS1P09382 135 aaKnown RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 PPIBP23284 216 aaKnown RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 S100A7P31151 101 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 MAGEA12P43365 314 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 EVX1P49640 407 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 RAB14P61106 215 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 BASP1P80723 227 aaKnown RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 RUNX1Q01196 453 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 POU6F1Q14863 301 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 SPANXN3Q5MJ09 141 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 C10orf126Q8N4M7 172 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 ANKRD29Q8N6D5 301 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR51A2Q8NGJ7 313 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR5C1Q8NGR4 320 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 GNPDA2Q8TDQ7 276 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 DERL1Q9BUN8 251 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 TMEM147Q9BVK8 224 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 TTTY13Q9BZ97 58 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 ULBP3Q9BZM4 244 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR8D2Q9GZM6 311 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 MIXL1Q9H2W2 232 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 ARMC1Q9NVT9 282 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 CMTM6Q9NX76 183 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 PAQR5Q9NXK6 330 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 STOML2Q9UJZ1 356 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 FN1P02751 2386 aaKnown RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 ROCK1Q13464 1354 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 CUL9Q8IWT3 2517 aa0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 DENND4BO75064 1496 aaPredicted RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 SCAF11Q99590 1463 aaKnown RBP0.79□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRAV9-1A0A075B6T8 112 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 MEIKINA0A087WXM9 373 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TRGV4A0A0C4DH28 118 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 MDFIC2A0A1B0GVS7 189 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 DPRXA6NFQ7 191 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 GGT3PA6NGU5 568 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF705FA8MVS1 300 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 PIRO00625 290 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 KLRC4O43908 158 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 OR2J2O76002 312 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 NAPSAO96009 420 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 SULT1A3P0DMM9 295 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 SULT1A4P0DMN0 295 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 COX6A1P12074 109 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 MSNP26038 577 aaKnown RBP0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPL28P46779 137 aaKnown RBP0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 RPS20P60866 119 aaKnown RBP0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 HBA1P69905 142 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 GLO1Q04760 184 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 KRR1Q13601 381 aaKnown RBP0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 NUMA1Q14980 2115 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 KCNJ8Q15842 424 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 MOGQ16653 247 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TPRXLQ17RH7 258 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 ZNF791Q3KP31 576 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 Q6Q795 121 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 SLC35E3Q7Z769 313 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 DEFB128Q7Z7B8 93 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TMED4Q7Z7H5 227 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 LYG2Q86SG7 212 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TERB2Q8NHR7 220 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 PFN4Q8NHR9 129 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 ACOT12Q8WYK0 555 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 C11orf40Q8WZ69 217 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 H1FXQ92522 213 aaKnown RBP0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 FGF13Q92913 245 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 GPR146Q96CH1 333 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 IMMP2LQ96T52 175 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 SIGMAR1Q99720 223 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 DOHHQ9BU89 302 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 KIFC1Q9BW19 673 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TTTY12Q9BZ98 90 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 VCX3BQ9H321 246 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 BOLA2Q9H3K6 86 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 C14orf105Q9NVL8 296 aa0.78□□□□□ -2.28
HMGB1P33-201ENST00000563485 TVP23BQ9NYZ1 205 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms