RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 DOLPP1Q86YN1 238 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 Q8N7P7 452 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 OR1A1Q9P1Q5 309 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 ZG16O60844 167 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 UFSP1Q6NVU6 142 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 GTF2H5Q6ZYL4 71 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 ZDHHC16Q969W1 377 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 TMEM70Q9BUB7 260 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 COMMD5Q9GZQ3 224 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 NPVFQ9HCQ7 196 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 OR51B2Q9Y5P1 312 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 MED12LQ86YW9 2145 aa11.63□□□□□ -0.55
GTF3C1-203ENST00000562609 A0A1B0GV72 72 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 C22orf46C9J442 243 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 SPINK9Q5DT21 86 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 LIN7CQ9NUP9 197 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 CLCF1Q9UBD9 225 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 C9JCJ5 164 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 MT-CO2P00403 227 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 AZU1P20160 251 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 OR2T6Q8NHC8 308 aa11.62□□□□□ -0.55
GTF3C1-203ENST00000562609 PPIAL4DF5H284 164 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 FTH1P19P0C7X4 201 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 USF1P22415 310 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 CCL11P51671 97 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 SMAGPQ0VAQ4 97 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 ZNF718Q3SXZ3 478 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 TMEM45BQ96B21 275 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 FER1L6-AS2Q96M78 137 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 GTSF1LQ9H1H1 148 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 SMPXQ9UHP9 88 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 ESPL1Q14674 2120 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 CXorf1O96002 111 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 STAG3L2P0CL84 134 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 STAG3L3P0CL85 134 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 VWC2Q2TAL6 325 aa11.61□□□□□ -0.55
GTF3C1-203ENST00000562609 C5orf49A4QMS7 147 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 CRYBB3P26998 211 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 SCGB2A2Q13296 93 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 SPACA3Q8IXA5 215 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 AP1S3Q96PC3 154 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 TNFRSF19Q9NS68 423 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 PIEZO2Q9H5I5 2752 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 TRGV10A0A0A0MS01 117 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 MGST1P10620 155 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 G6PCP35575 357 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 GNG4P50150 75 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 MDS2Q8NDY4 140 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 UBALD1Q8TB05 177 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 SERTAD4Q9NUC0 356 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 LY96Q9Y6Y9 160 aa11.6□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A10PA6NDY2 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A18PA6NE21 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A16PA6NEW6 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A20PA6NIJ5 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A8PA6NJQ4 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A7PA6NKC0 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A22PA8MWA6 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A12PA8MX19 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A5PA8MXJ8 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A23PA8MXZ1 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 KLRC4-KLRK1H3BQV0 150 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 NGFP01138 241 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A15PP0C7V4 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A13PP0C7W8 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A14PP0C7W9 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FAM90A24PP0C7X0 464 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 COL8A2P25067 703 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 PET117Q6UWS5 81 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 PQLC2Q6ZP29 291 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 NAA38Q9BRA0 125 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 ZNF331Q9NQX6 463 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 PPIAL4EA0A075B759 164 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 PPIAL4CA0A0B4J2A2 164 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 PPIAL4FP0DN26 164 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 CD1BP29016 333 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 RPL8P62917 257 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 WDR83OSQ9Y284 106 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 hCG_38984A0A1B0GV85 526 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 SH2D7A6NKC9 451 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 LRRC30A6NM36 301 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 RBMXL2O75526 392 aaKnown RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 PPOXP50336 477 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 FGF12P61328 243 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 PCBD1P61457 104 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 ZNF766Q5HY98 468 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 ATP6V0BQ99437 205 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 SPRR3Q9UBC9 169 aa11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 KLF13Q9Y2Y9 288 aaPredicted RBP11.59□□□□□ -0.55
GTF3C1-203ENST00000562609 IGKV3D-15A0A087WSY6 115 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 CA1P00915 261 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 OR10J4P0C629 311 aa11.58□□□□□ -0.56
GTF3C1-203ENST00000562609 GPR183P32249 361 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms