RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 CEMP1Q6PRD7 247 aaPredicted RBP12.34□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 KIR2DL5AQ8N109 375 aa12.34□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 KIR2DL5BQ8NHK3 375 aa12.34□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 Q9H521 79 aa12.34□□□□□ -0.43
VPS9D1-AS1-201ENST00000562298 OR4C46A6NHA9 309 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 C15orf62A8K5M9 175 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 K7EMT4 169 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TMEM127O75204 238 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 CTSDP07339 412 aaPredicted RBP12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 CTSGP08311 255 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 NAT1P18440 290 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TAS2R20P59543 309 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 Q56UQ5 140 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 UBE2NLQ5JXB2 153 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 CADM3Q8N126 398 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 STPG3Q8N7X2 389 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 S100A16Q96FQ6 103 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 MAP6D1Q9H9H5 199 aa12.33□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 SNAPC5O75971 98 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 ATF4P18848 351 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 FCGR2BP31994 310 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 ZNF124Q15973 351 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TMEM69Q5SWH9 247 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 CMTM1Q8IZ96 169 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 OR5H2Q8NGV7 314 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 OR5B3Q8NH48 314 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 GALNT14Q96FL9 552 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 RNF2Q99496 336 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TMEM14BQ9NUH8 114 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 SMPXQ9UHP9 88 aa12.32□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 GPR31O00270 319 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TAS2R46P59540 309 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 LYSMD2Q8IV50 215 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TSPAN14Q8NG11 270 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 OR1P1Q8NH06 330 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TMEM56Q96MV1 263 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 PRNDQ9UKY0 176 aa12.31□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 IGHV7-4-1A0A0J9YVY3 117 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 I3L2K1 104 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 CHEK1O14757 476 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 HRH1P35367 487 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 RPS19P39019 145 aaKnown RBP12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 CROCCP3Q8IVE0 287 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 SAMD12Q8N8I0 201 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 OR6F1Q8NGZ6 308 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 OR10C1Q96KK4 312 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 RHPN1-AS1Q9BWJ2 59 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 FKBP11Q9NYL4 201 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 DNAH10Q8IVF4 4471 aa12.3□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 IGHV3-49A0A0A0MS15 119 aa12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 HLA-DMAP28067 261 aa12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 RELQ04864 619 aaPredicted RBP12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 RPP25LQ8N5L8 163 aaKnown RBP12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 SLC25A46Q96AG3 418 aa12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 KLK5Q9Y337 293 aaPredicted RBP12.29□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 NUPL2O15504 423 aaKnown RBP12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 IGHV3-48P01763 117 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 PRSS3P35030 304 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TFPI2P48307 235 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 KCTD21Q4G0X4 260 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TMEM217Q8N7C4 229 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 ZNF114Q8NC26 417 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 PHLDA1Q8WV24 401 aaPredicted RBP12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 MISP3Q96FF7 219 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 SEC22AQ96IW7 307 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 TSC22D3Q99576 134 aa12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 NXF2Q9GZY0 626 aaKnown RBP12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 FAM212BQ9NTI7 297 aaPredicted RBP12.28□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 VPS13DQ5THJ4 4388 aa12.27□□□□□ -0.44
VPS9D1-AS1-201ENST00000562298 IGKV3-7A0A075B6H7 116 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 IGHV3OR16-13A0A075B7E8 117 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 IGHV3-74A0A0B4J1X5 117 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 YIF1AO95070 293 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 LSM3P62310 102 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 FAM90A2PQ658T7 463 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 TBC1D26Q86UD7 250 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 CSTL1Q9H114 145 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 HECTD4Q9Y4D8 3996 aa12.27□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 MT-CO2P00403 227 aa12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 EIF4EP06730 217 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 MFAP4P55083 255 aa12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 PRCDQ00LT1 54 aa12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 GBGT1Q8N5D6 347 aa12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 GPX8Q8TED1 209 aa12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 YIPF6Q96EC8 236 aa12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 TXN2Q99757 166 aa12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 C6orf62Q9GZU0 229 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 HERC2O95714 4834 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 TRAV14DV4A0A0A6YYC5 116 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 MPTX1A8MV57 137 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 DEDDO75618 318 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 TSPAN5P62079 268 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 H2BFWTQ7Z2G1 175 aa12.25□□□□□ -0.45
VPS9D1-AS1-201ENST00000562298 OR4A16Q8NH70 328 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms