RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ZNF793Q6ZN11 406 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 KLHDC1Q8N7A1 406 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 STARD4Q96DR4 205 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 CNRIP1Q96F85 164 aaPredicted RBP4.47□□□□□ -1.69
CAPN3-211ENST00000562199 FMC1Q96HJ9 113 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 TM2D1Q9BX74 207 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 AICDAQ9GZX7 198 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 WDR13Q9H1Z4 485 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 NPVFQ9HCQ7 196 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 NRN1Q9NPD7 142 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 KCNE3Q9Y6H6 103 aa4.47□□□□□ -1.69
CAPN3-211ENST00000562199 MUC22E2RYF6 1773 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 FXYD6-FXYD2A0A087WZ82 144 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 TRAV26-2A0A0B4J265 109 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 TEX50A0A1B0GTY4 177 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 ODAMA1E959 279 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 C5orf63A6NC05 138 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 NCBP2LA6PVI3 153 aaKnown RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 CD300LBA8K4G0 201 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 PATE3B3GLJ2 98 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 C4orf51C9J302 202 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 F5H697 171 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 PGLYRP1O75594 196 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 DPM2O94777 84 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 DUS4LO95620 317 aaKnown RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 TNFP01375 233 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 P01737 135 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 IGHMP01871 453 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 FGF6P10767 208 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 SNCAP37840 140 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 KIR2DS2P43631 304 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 THBS3P49746 956 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 P2RX1P51575 399 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 HNRNPA3P51991 378 aaKnown RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 DPTQ07507 201 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 ARL16Q0P5N6 197 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 KLRD1Q13241 179 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 IL15RAQ13261 267 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 ENDOGQ14249 297 aaKnown RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 CSRP2Q16527 193 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 LRRC37A5PQ49AS3 106 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 VAX1Q5SQQ9 334 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 OR2T2Q6IF00 324 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 SLC25A26Q70HW3 274 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 LRP11Q86VZ4 500 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 PRIMA1Q86XR5 153 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 C11orf53Q8IXP5 236 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 ZCCHC24Q8N2G6 241 aaKnown RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 CIARTQ8N365 385 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 RAB42Q8N4Z0 105 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 OR4B1Q8NGF8 309 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 PFN4Q8NHR9 129 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 MRPL24Q96A35 216 aaKnown RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 PRR25Q96S07 402 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 FXYD6Q9H0Q3 95 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 TCEAL2Q9H3H9 227 aaPredicted RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 CHD3Q12873 2000 aaKnown RBP4.46□□□□□ -1.7
CAPN3-211ENST00000562199 DENND4CQ5VZ89 1909 aa4.46□□□□□ -1.7
CAPN3-211ENST00000562199 TRAV14DV4A0A0A6YYC5 116 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 A1L4Q6 167 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 SHISA9B4DS77 424 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 J3QQQ9 107 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 K7EP34 96 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 RER1O15258 196 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 PIN1P1O15428 100 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 FOXS1O43638 330 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 LMX1BO60663 402 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 RAMP1O60894 148 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 PPP1R3DO95685 299 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 CGAP01215 116 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 MMP7P09237 267 aaPredicted RBP4.45□□□□□ -1.7
CAPN3-211ENST00000562199 IFI6P09912 130 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 CDKN2AP42771 156 aaKnown RBP4.45□□□□□ -1.7
CAPN3-211ENST00000562199 RPS10P46783 165 aaKnown RBP4.45□□□□□ -1.7
CAPN3-211ENST00000562199 H2BFSP57053 126 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 TAS2R46P59540 309 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 SSBP1Q04837 148 aaKnown RBP4.45□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF345Q14585 488 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF141Q15928 474 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 ZNF726P1Q15940 193 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 MIDNQ504T8 468 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 GFI1BQ5VTD9 330 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 SLC35E4Q6ICL7 350 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 SGPP2Q8IWX5 399 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 C9orf40Q8IXQ3 194 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 SLC25A45Q8N413 288 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 PAQR4Q8N4S7 273 aaPredicted RBP4.45□□□□□ -1.7
CAPN3-211ENST00000562199 KCNRGQ8N5I3 272 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 RFLNBQ8N5W9 214 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 DEFB125Q8N687 156 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 ZDHHC22Q8N966 263 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 OR5D14Q8NGL3 314 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 OR4C16Q8NGL9 310 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 CT55Q8WUE5 264 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 MS4A6EQ96DS6 147 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 S100A16Q96FQ6 103 aaKnown RBP4.45□□□□□ -1.7
CAPN3-211ENST00000562199 COX14Q96I36 57 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
CAPN3-211ENST00000562199 CARD19Q96LW7 228 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms