RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FAM122AQ96E09 287 aa7.93□□□□□ -1.14
SMG1-205ENST00000561947 ZNF430Q9H8G1 570 aaPredicted RBP7.93□□□□□ -1.14
SMG1-205ENST00000561947 TMEM242Q9NWH2 141 aa7.93□□□□□ -1.14
SMG1-205ENST00000561947 SLC45A2Q9UMX9 530 aa7.93□□□□□ -1.14
SMG1-205ENST00000561947 MALRD1Q5VYJ5 2156 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 ATRXP46100 2492 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 SLC25A17O43808 307 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 LY6HO94772 140 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 LINC00869P0C866 280 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 CD69Q07108 199 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 GAMTQ14353 236 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 ZNF343Q6P1L6 599 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 SPNS3Q6ZMD2 512 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 MOB3BQ86TA1 216 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 BEND2Q8NDZ0 799 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 NEU4Q8WWR8 484 aaPredicted RBP7.92□□□□□ -1.14
SMG1-205ENST00000561947 RITA1Q96K30 269 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 KLF2Q9Y5W3 355 aaPredicted RBP7.92□□□□□ -1.14
SMG1-205ENST00000561947 IGHV3-72A0A0B4J1Y9 119 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 ENSAO43768 121 aaKnown RBP7.92□□□□□ -1.14
SMG1-205ENST00000561947 SOD3P08294 240 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 UBE2G2P60604 165 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 ADIRFQ15847 76 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 C10orf55Q5SWW7 151 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 LY6G5BQ8NDX9 201 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 TIMD4Q96H15 378 aa7.92□□□□□ -1.14
SMG1-205ENST00000561947 BUB1B-PAK6H3BSN5 160 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 CLDN34H7C241 214 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 PDE6DO43924 150 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 CXCL1P09341 107 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 COX7A1P24310 79 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 GPX4P36969 197 aaPredicted RBP7.91□□□□□ -1.14
SMG1-205ENST00000561947 ATP5G3P48201 142 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 RND2P52198 227 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 RPL23P62829 140 aaKnown RBP7.91□□□□□ -1.14
SMG1-205ENST00000561947 PRB3Q04118 309 aaPredicted RBP7.91□□□□□ -1.14
SMG1-205ENST00000561947 WT1-ASQ06250 92 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 MRGPRG-AS1Q2M3A8 158 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 SPATA31B1PQ5VZV4 182 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 C1QL4Q86Z23 238 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 TEX45Q8NA69 505 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 NANPQ8TBE9 248 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 CACNG8Q8WXS5 425 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 SLC35E1Q96K37 410 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 CTDSP1Q9GZU7 261 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 TPSG1Q9NRR2 321 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 PRELID1Q9Y255 219 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 URGCP-MRPS24S4R325 110 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 ABCA4P78363 2273 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 IGKV1OR2-108A0A075B7D4 117 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 IGHV1-3A0A0C4DH29 117 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 C22orf46C9J442 243 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 LIPFP07098 398 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 NPPCP23582 126 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 OR10J1P30954 320 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 MLANAQ16655 118 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 CST9LP1Q5W188 147 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 SLC16A13Q7RTY0 426 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 OR4P4Q8NGL7 312 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 TXNDC17Q9BRA2 123 aa7.91□□□□□ -1.14
SMG1-205ENST00000561947 SEPSECSQ9HD40 501 aaKnown RBP7.91□□□□□ -1.14
SMG1-205ENST00000561947 AMMECR1Q9Y4X0 333 aaPredicted RBP7.91□□□□□ -1.14
SMG1-205ENST00000561947 COL6A6A6NMZ7 2263 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 RELNP78509 3460 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 TGIF2-C20orf24A0A0A6YYL0 155 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 F6UZH7 168 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 GCHFRP30047 84 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 RPS10P46783 165 aaKnown RBP7.9□□□□□ -1.14
SMG1-205ENST00000561947 DTX2Q86UW9 622 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 ONECUT1Q9UBC0 465 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 INSIG2Q9Y5U4 225 aa7.9□□□□□ -1.14
SMG1-205ENST00000561947 A0A1W2PPI3 338 aa7.9□□□□□ -1.15
SMG1-205ENST00000561947 CRYGBP07316 175 aa7.9□□□□□ -1.15
SMG1-205ENST00000561947 SUB1P53999 127 aaKnown RBP eCLIP7.9□□□□□ -1.15
SMG1-205ENST00000561947 GNB1P62873 340 aa7.9□□□□□ -1.15
SMG1-205ENST00000561947 MMD2Q8IY49 270 aa7.9□□□□□ -1.15
SMG1-205ENST00000561947 PNKDQ8N490 385 aa7.9□□□□□ -1.15
SMG1-205ENST00000561947 RNASEH2CQ8TDP1 164 aaKnown RBP7.9□□□□□ -1.15
SMG1-205ENST00000561947 TMUB1Q9BVT8 246 aa7.9□□□□□ -1.15
SMG1-205ENST00000561947 ZZEF1O43149 2961 aa7.9□□□□□ -1.15
SMG1-205ENST00000561947 VENTXO95231 258 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 MT-CO2P00403 227 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 S100A6P06703 90 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 SNRPEP62304 92 aaKnown RBP7.89□□□□□ -1.15
SMG1-205ENST00000561947 PRSS8Q16651 343 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 FAM78BQ5VT40 261 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 MIR17HGQ75NE6 70 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 RPEQ96AT9 228 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 SSX3Q99909 188 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 CHODLQ9H9P2 273 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 FUT9Q9Y231 359 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 NBASA2RRP1 2371 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 C5orf52A6NGY3 159 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 LY6LH3BQJ8 138 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 CLN5O75503 358 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 CNTFRP26992 372 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 PSG5Q15238 335 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 C16orf82Q7Z2V1 217 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 OR51G1Q8NGK1 321 aa7.89□□□□□ -1.15
SMG1-205ENST00000561947 OR2T6Q8NHC8 308 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms