RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 DGCR14Q96DF8 476 aaKnown RBP8.63□□□□□ -1.03
USP3-220ENST00000561381 BSCL2Q96G97 398 aaPredicted RBP8.63□□□□□ -1.03
USP3-220ENST00000561381 ZNF414Q96IQ9 312 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 SPAG8Q99932 426 aaPredicted RBP8.63□□□□□ -1.03
USP3-220ENST00000561381 FXYD6Q9H0Q3 95 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 DAZ1Q9NQZ3 744 aaKnown RBP8.63□□□□□ -1.03
USP3-220ENST00000561381 C21orf62Q9NYP8 219 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 OR51B2Q9Y5P1 312 aa8.63□□□□□ -1.03
USP3-220ENST00000561381 F11RQ9Y624 299 aaKnown RBP8.63□□□□□ -1.03
USP3-220ENST00000561381 CXorf65A6NEN9 183 aa8.62□□□□□ -1.03
USP3-220ENST00000561381 RPS19P39019 145 aaKnown RBP8.62□□□□□ -1.03
USP3-220ENST00000561381 LSM3P62310 102 aaKnown RBP8.62□□□□□ -1.03
USP3-220ENST00000561381 THOC7Q6I9Y2 204 aaKnown RBP8.62□□□□□ -1.03
USP3-220ENST00000561381 LYG2Q86SG7 212 aa8.62□□□□□ -1.03
USP3-220ENST00000561381 SLC38A6Q8IZM9 456 aa8.62□□□□□ -1.03
USP3-220ENST00000561381 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
USP3-220ENST00000561381 UBAC2Q8NBM4 344 aa8.62□□□□□ -1.03
USP3-220ENST00000561381 OR5H2Q8NGV7 314 aa8.62□□□□□ -1.03
USP3-220ENST00000561381 LINC00476Q8WZB0 136 aa8.62□□□□□ -1.03
USP3-220ENST00000561381 LSM10Q969L4 123 aaKnown RBP8.62□□□□□ -1.03
USP3-220ENST00000561381 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
USP3-220ENST00000561381 GPR31O00270 319 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 NDUFA4O00483 81 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 CYB5BO43169 146 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 SPRY2O43597 315 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 SNAPC5O75971 98 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 CTSDP07339 412 aaPredicted RBP8.61□□□□□ -1.03
USP3-220ENST00000561381 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
USP3-220ENST00000561381 NAT1P18440 290 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 HLA-DMAP28067 261 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 HRH1P35367 487 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 APOC4P55056 127 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 PHLDA2Q53GA4 152 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 Q56UQ5 140 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 UBE2NLQ5JXB2 153 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 TMEM69Q5SWH9 247 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 SPSB3Q6PJ21 355 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 Q6ZWC4 215 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 HSD17B13Q7Z5P4 300 aaPredicted RBP8.61□□□□□ -1.03
USP3-220ENST00000561381 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 LYSMD2Q8IV50 215 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 KRTAP4-12Q9BQ66 201 aa8.61□□□□□ -1.03
USP3-220ENST00000561381 IGHV3-49A0A0A0MS15 119 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 TMEM127O75204 238 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 LY6G6CO95867 125 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 IGHV3-48P01763 117 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 CTSGP08311 255 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 BMI1P35226 326 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 TAS2R46P59540 309 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 TNFRSF9Q07011 255 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 ZNF124Q15973 351 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 KCTD21Q4G0X4 260 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 LAMTOR1Q6IAA8 161 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 CMTM1Q8IZ96 169 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 TSPAN14Q8NG11 270 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 OR6F1Q8NGZ6 308 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 OR5B3Q8NH48 314 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 RNF2Q99496 336 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 PRNDQ9UKY0 176 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
USP3-220ENST00000561381 C15orf61A6NNL5 157 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 K7EMT4 169 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 IGKV1-39P01597 117 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 IGKV1D-39P04432 117 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 EIF4EP06730 217 aaKnown RBP8.59□□□□□ -1.03
USP3-220ENST00000561381 FCGR2BP31994 310 aaPredicted RBP8.59□□□□□ -1.03
USP3-220ENST00000561381 PRSS3P35030 304 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 CEMP1Q6PRD7 247 aaPredicted RBP8.59□□□□□ -1.03
USP3-220ENST00000561381 CROCCP3Q8IVE0 287 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 CADM3Q8N126 398 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 STPG3Q8N7X2 389 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 RNF183Q96D59 192 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 YIPF6Q96EC8 236 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 MISP3Q96FF7 219 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
USP3-220ENST00000561381 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 IGHV3OR16-13A0A075B7E8 117 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 IGHV3-74A0A0B4J1X5 117 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 KIR2DL5BA0A0G2JN68 375 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 KIR2DL5BA0A0G2JPC4 375 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 OR4C46A6NHA9 309 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 I3L2K1 104 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 UBE2CO00762 179 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 CHEK1O14757 476 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 YIF1AO95070 293 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 TFPI2P48307 235 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 TBC1D26Q86UD7 250 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 KIR2DL5AQ8N109 375 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 OR1P1Q8NH06 330 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 GPX8Q8TED1 209 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 SLC25A46Q96AG3 418 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 SEC22AQ96IW7 307 aa8.58□□□□□ -1.04
USP3-220ENST00000561381 TMEM56Q96MV1 263 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms