RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 Q96M66 194 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 CMSS1Q9BQ75 279 aaKnown RBP6.85□□□□□ -1.31
HERC1-210ENST00000560897 FAAP24Q9BTP7 215 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 C20orf24Q9BUV8 137 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 TM2D1Q9BX74 207 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 LPAR5Q9H1C0 372 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 RABL2AQ9UBK7 228 aaPredicted RBP6.85□□□□□ -1.31
HERC1-210ENST00000560897 TBC1D24Q9ULP9 559 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 RABL2BQ9UNT1 228 aa6.85□□□□□ -1.31
HERC1-210ENST00000560897 IGKV3-7A0A075B6H7 116 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 NBDYA0A0U1RRE5 68 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 A0A1B0GW64 132 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 SRRM4A7MD48 611 aaKnown RBP6.84□□□□□ -1.31
HERC1-210ENST00000560897 NPIPB5A8MRT5 1133 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 SOCS1O15524 211 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 HPGDSO60760 199 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 INPP1P49441 399 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 PAFAH1B2P68402 229 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 UNC119Q13432 240 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 IL18Q14116 193 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 SPANXN2Q5MJ10 180 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 MMD2Q8IY49 270 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.84□□□□□ -1.31
HERC1-210ENST00000560897 OR5H6Q8NGV6 325 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 DYNC2LI1Q8TCX1 351 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 FYTTD1Q96QD9 318 aaKnown RBP6.84□□□□□ -1.31
HERC1-210ENST00000560897 OR2A7Q96R45 310 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 KCNK15Q9H427 330 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 ZNF430Q9H8G1 570 aaPredicted RBP6.84□□□□□ -1.31
HERC1-210ENST00000560897 EXTL2Q9UBQ6 330 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 HSF4Q9ULV5 492 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 MGAT4AQ9UM21 535 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
HERC1-210ENST00000560897 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 FABP12A6NFH5 140 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 HMX3A6NHT5 357 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 ZNF705EA8MWA4 302 aaPredicted RBP6.83□□□□□ -1.32
HERC1-210ENST00000560897 TGOLN2O43493 480 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 PROP1O75360 226 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 GNB3P16520 340 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 PRSS3P35030 304 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 CBX5P45973 191 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 CNPY1Q3B7I2 92 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 C10orf55Q5SWW7 151 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 MORN3Q6PF18 240 aaPredicted RBP6.83□□□□□ -1.32
HERC1-210ENST00000560897 C6orf201Q7Z4U5 140 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 FAM89BQ8N5H3 189 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 ZNF503Q96F45 646 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 ARHGAP5-AS1Q96IT6 56 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 PECRQ9BY49 303 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 ZNF436Q9C0F3 470 aaPredicted RBP6.83□□□□□ -1.32
HERC1-210ENST00000560897 IFT46Q9NQC8 304 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 TMEM14BQ9NUH8 114 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 OR1A1Q9P1Q5 309 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 HMCN2Q8NDA2 5059 aa6.83□□□□□ -1.32
HERC1-210ENST00000560897 MFSD2BA6NFX1 497 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 CTDSP2O14595 271 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 CRYZL1O95825 349 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 SPP1P10451 314 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 HIST1H1DP16402 221 aaKnown RBP6.82□□□□□ -1.32
HERC1-210ENST00000560897 QRFPP83859 136 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 CDK10Q15131 360 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 LEMD1Q68G75 181 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 C19orf35Q6ZS72 473 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 Q6ZSN1 163 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 SNX29P2Q8IUI4 249 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 RBM38Q9H0Z9 239 aaKnown RBP6.82□□□□□ -1.32
HERC1-210ENST00000560897 C12orf4Q9NQ89 552 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 MDFICQ9P1T7 246 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 RBM7Q9Y580 266 aaKnown RBP6.82□□□□□ -1.32
HERC1-210ENST00000560897 X6R8D5 127 aa6.82□□□□□ -1.32
HERC1-210ENST00000560897 ZNF207O43670 478 aaKnown RBP6.81□□□□□ -1.32
HERC1-210ENST00000560897 SAA1P0DJI8 122 aaPredicted RBP6.81□□□□□ -1.32
HERC1-210ENST00000560897 HTN3P15516 51 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 ELK1P19419 428 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 RPL27AP46776 148 aaKnown RBP6.81□□□□□ -1.32
HERC1-210ENST00000560897 TAS2R20P59543 309 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 ARPC4P59998 168 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 HLA-DRB3P79483 266 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 PLA2G7Q13093 441 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 PYDC2Q56P42 97 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 HACD4Q5VWC8 232 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 SIGIRRQ6IA17 410 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 SSX9Q7RTT3 188 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 GBGT1Q8N5D6 347 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 OSR1Q8TAX0 266 aaPredicted RBP6.81□□□□□ -1.32
HERC1-210ENST00000560897 FCAMRQ8WWV6 532 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 PPP1R14BQ96C90 147 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 FANCD2OSQ96PS1 177 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 RNF2Q99496 336 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 OR2D2Q9H210 308 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 THYN1Q9P016 225 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 AK3Q9UIJ7 227 aa6.81□□□□□ -1.32
HERC1-210ENST00000560897 TMEM235A6NFC5 223 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 TEX22C9J3V5 150 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 K7EMT4 169 aa6.8□□□□□ -1.32
HERC1-210ENST00000560897 DNASE2O00115 360 aaPredicted RBP6.8□□□□□ -1.32
HERC1-210ENST00000560897 RAB27BO00194 218 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms