RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 TEX50A0A1B0GTY4 177 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 SMLR1H3BR10 107 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 ARPC5O15511 151 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 FGF16O43320 207 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 NDUFA3O95167 84 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 IFNA10P01566 189 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 IGLV2-23P01705 113 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 PAX6P26367 422 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
LDLR-212ENST00000560467 IL15RAQ13261 267 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 LY6EQ16553 131 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 ZNF562Q6V9R5 426 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 ACOT7LQ6ZUV0 252 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 RITA1Q96K30 269 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 SRSF8Q9BRL6 282 aaKnown RBP9.33□□□□□ -0.92
LDLR-212ENST00000560467 MFFQ9GZY8 342 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 U3KQ87 197 aa9.33□□□□□ -0.92
LDLR-212ENST00000560467 TRAV3A0A0B4J244 114 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 TSC22D2O75157 780 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 IL6RP08887 468 aaPredicted RBP9.32□□□□□ -0.92
LDLR-212ENST00000560467 HTR2BP41595 481 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 AP2S1P53680 142 aaPredicted RBP9.32□□□□□ -0.92
LDLR-212ENST00000560467 HBG1P69891 147 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 HBG2P69892 147 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 PRCDQ00LT1 54 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 TMEM267Q0VDI3 215 aaPredicted RBP9.32□□□□□ -0.92
LDLR-212ENST00000560467 OR2F1Q13607 317 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 FXYD3Q14802 87 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 AARDQ4LEZ3 155 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 ARSJQ5FYB0 599 aaPredicted RBP9.32□□□□□ -0.92
LDLR-212ENST00000560467 SPANXN5Q5MJ07 72 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 REC114Q7Z4M0 266 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 OR2C3Q8N628 320 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 Q8N6K4 173 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 OR1L6Q8NGR2 347 aa9.32□□□□□ -0.92
LDLR-212ENST00000560467 KANTRA0A1W2PQU2 76 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 A6NDX4 124 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 CA2P00918 260 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 CRYGBP07316 175 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 IAPPP10997 89 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 CNTFRP26992 372 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 RPL12P30050 165 aaKnown RBP9.31□□□□□ -0.92
LDLR-212ENST00000560467 BAXQ07812 192 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 C9orf152Q5JTZ5 239 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 GRPEL2Q8TAA5 225 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 ARPC1AQ92747 370 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 TMEM68Q96MH6 324 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 PLSCR3Q9NRY6 295 aa9.31□□□□□ -0.92
LDLR-212ENST00000560467 TET2Q6N021 2002 aaPredicted RBP9.31□□□□□ -0.92
LDLR-212ENST00000560467 RYR3Q15413 4870 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 MSGN1A6NI15 193 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 TAAR5O14804 337 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 HLA-DRB1P01911 266 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 IFNA4P05014 189 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 OR8U8P0C7N1 319 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 DEFA4P12838 97 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 LYL1P12980 280 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 EIF5AP63241 154 aaKnown RBP9.3□□□□□ -0.92
LDLR-212ENST00000560467 CX3CL1P78423 397 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 CD300CQ08708 224 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 PJVKQ0ZLH3 352 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 NSUN5P1Q3KNT7 163 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 OR10P1Q8NGE3 313 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 OR2T6Q8NHC8 308 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 SRSF12Q8WXF0 261 aaKnown RBP9.3□□□□□ -0.92
LDLR-212ENST00000560467 RNF126Q9BV68 326 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 GON7Q9BXV9 100 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 NPFFR1Q9GZQ6 430 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 NDUFA4L2Q9NRX3 87 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 LYRM2Q9NU23 88 aaPredicted RBP9.3□□□□□ -0.92
LDLR-212ENST00000560467 AURKAIP1Q9NWT8 199 aaPredicted RBP9.3□□□□□ -0.92
LDLR-212ENST00000560467 OR5AC2Q9NZP5 309 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 TNFSF18Q9UNG2 199 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 HSPB11Q9Y547 144 aa9.3□□□□□ -0.92
LDLR-212ENST00000560467 TRAV14DV4A0A0A6YYC5 116 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 BORCS7-ASMTA0A0B4J1R7 106 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 OR13C7P0DN81 318 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 SULT1A1P50225 295 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 ZNF345Q14585 488 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 Q5BKY6 102 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 SPINK9Q5DT21 86 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 Q8N9W7 124 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 SLC24A4Q8NFF2 622 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 PIFOQ8TCI5 191 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 PINX1Q96BK5 328 aaKnown RBP9.29□□□□□ -0.92
LDLR-212ENST00000560467 AQP10Q96PS8 301 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 ARL6Q9H0F7 186 aa9.29□□□□□ -0.92
LDLR-212ENST00000560467 INS-IGF2F8WCM5 200 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 H0YIZ8 118 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 BOLA2-SMG1P6H3BVE0 249 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 CORTO00230 105 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 FCN1O00602 326 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 DFFBO76075 338 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 CD28P10747 220 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 NPY1RP25929 384 aa9.28□□□□□ -0.92
LDLR-212ENST00000560467 S100A11P31949 105 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms