RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 METTL21EPA6NDL7 271 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 ERICH4A6NGS2 130 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 ZNF705EA8MWA4 302 aaPredicted RBP11.96□□□□□ -0.49
HERC1-207ENST00000560316 DNASE2O00115 360 aaPredicted RBP11.96□□□□□ -0.49
HERC1-207ENST00000560316 HPRT1P00492 218 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 C4BPBP20851 252 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 RELQ04864 619 aaPredicted RBP11.96□□□□□ -0.49
HERC1-207ENST00000560316 POU2AF1Q16633 256 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 Q6ZR54 194 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 LILRB2Q8N423 598 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 DMBX1Q8NFW5 382 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 HINT2Q9BX68 163 aa11.96□□□□□ -0.49
HERC1-207ENST00000560316 AGRNO00468 2067 aa11.96□□□□□ -0.5
HERC1-207ENST00000560316 IFITM5A6NNB3 132 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 RBFOX2O43251 390 aaKnown RBP eCLIP11.95□□□□□ -0.5
HERC1-207ENST00000560316 DFFBO76075 338 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 TRAM1Q15629 374 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 HACD4Q5VWC8 232 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 THOC7Q6I9Y2 204 aaKnown RBP11.95□□□□□ -0.5
HERC1-207ENST00000560316 ST8SIA2Q92186 375 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 DGCR14Q96DF8 476 aaKnown RBP11.95□□□□□ -0.5
HERC1-207ENST00000560316 DCSTAMPQ9H295 470 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 CLEC5AQ9NY25 188 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
HERC1-207ENST00000560316 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 TMEM235A6NFC5 223 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 IFNA10P01566 189 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 APOHP02749 345 aaPredicted RBP11.94□□□□□ -0.5
HERC1-207ENST00000560316 PTHLHP12272 177 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 PSMA1P25786 263 aaKnown RBP11.94□□□□□ -0.5
HERC1-207ENST00000560316 HSD17B13Q7Z5P4 300 aaPredicted RBP11.94□□□□□ -0.5
HERC1-207ENST00000560316 TRPT1Q86TN4 253 aaKnown RBP11.94□□□□□ -0.5
HERC1-207ENST00000560316 PACRGLQ8N7B6 248 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 OR1L8Q8NGR8 309 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 NDUFA4L2Q9NRX3 87 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 HERC1Q15751 4861 aa11.94□□□□□ -0.5
HERC1-207ENST00000560316 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 EIF4EP06730 217 aaKnown RBP11.93□□□□□ -0.5
HERC1-207ENST00000560316 FCGR2CP31995 323 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 RPL11P62913 178 aaKnown RBP11.93□□□□□ -0.5
HERC1-207ENST00000560316 ARL6IP1Q15041 203 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 TMEM41BQ5BJD5 291 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 DMRTA1Q5VZB9 504 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 Q6ZRM9 215 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 UBE2DNLQ8IWF7 75 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 OR51H1Q8NH63 302 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
HERC1-207ENST00000560316 TBC1D24Q9ULP9 559 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 NSG2Q9Y328 171 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 LRP1BQ9NZR2 4599 aa11.93□□□□□ -0.5
HERC1-207ENST00000560316 KNCNA6PVL3 124 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 C16orf90A8MZG2 172 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 PDCD5O14737 125 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 SSX5O60225 188 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 CDK2AP2O75956 126 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 FGF2P09038 288 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 CATR1Q13166 79 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 MSMO1Q15800 293 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 SOHLH1Q5JUK2 328 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 MORN3Q6PF18 240 aaPredicted RBP11.92□□□□□ -0.5
HERC1-207ENST00000560316 SLC25A46Q96AG3 418 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 SLC5A7Q9GZV3 580 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 NXF2Q9GZY0 626 aaKnown RBP11.92□□□□□ -0.5
HERC1-207ENST00000560316 VSIRQ9H7M9 311 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 RABAC1Q9UI14 185 aa11.92□□□□□ -0.5
HERC1-207ENST00000560316 IFNA21P01568 189 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 IFNA17P01571 189 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 CD74P04233 296 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 CD5P06127 495 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 SPP1P10451 314 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 GNG2P59768 71 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 ZBTB34Q8NCN2 500 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 CSNK1G2-AS1Q8NCQ2 148 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 DUSP18Q8NEJ0 188 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 ACOT13Q9NPJ3 140 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 C8orf4Q9NR00 106 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 TMEM14BQ9NUH8 114 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 OR51B2Q9Y5P1 312 aa11.91□□□□□ -0.5
HERC1-207ENST00000560316 TRAV2A0A0B4J234 112 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 I3L2K1 104 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 PPYP01298 95 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 MFAP4P55083 255 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 FXYD4P59646 89 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 MLLT11Q13015 90 aaPredicted RBP11.9□□□□□ -0.5
HERC1-207ENST00000560316 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 AADACL3Q5VUY0 350 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 TOMM20LQ6UXN7 152 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 MISP3Q96FF7 219 aa11.9□□□□□ -0.5
HERC1-207ENST00000560316 TRAV1-2A0A0B4J238 106 aa11.89□□□□□ -0.51
HERC1-207ENST00000560316 SMIM30A4D0T7 59 aa11.89□□□□□ -0.51
HERC1-207ENST00000560316 MARCH11A6NNE9 402 aa11.89□□□□□ -0.51
HERC1-207ENST00000560316 ARPC4P59998 168 aa11.89□□□□□ -0.51
HERC1-207ENST00000560316 ERVK-16P61578 105 aa11.89□□□□□ -0.51
HERC1-207ENST00000560316 OR1P1Q8NH06 330 aa11.89□□□□□ -0.51
HERC1-207ENST00000560316 GINS3Q9BRX5 216 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms