RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 RANGRFQ9HD47 186 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 CACNG5Q9UF02 275 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 NSG2Q9Y328 171 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 TRBV7-1A0A0A6YYK4 115 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 HMX3A6NHT5 357 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 INMT-MINDY4F8WBC2 141 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 ST8SIA3O43173 380 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 PF4P02776 101 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 OR8U8P0C7N1 319 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 ANXA7P20073 488 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 HTR2BP41595 481 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 RHOGP84095 191 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 ATP5G2Q06055 141 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 ANKRD55Q3KP44 614 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 OR2C3Q8N628 320 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 OR1S1Q8NH92 325 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 VN1R17PQ8TDU5 208 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 DPF1Q92782 380 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 KLK15Q9H2R5 256 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 HSPB7Q9UBY9 170 aa9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
RABGGTA-215ENST00000560207 WNK1Q9H4A3 2382 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 CGB1A6NKQ9 187 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 E7EUB6 86 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 I3L521 148 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 HSPB1P04792 205 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 AREGP15514 252 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 ZP3P21754 424 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 RPP30P78346 268 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 WT1-ASQ06250 92 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 TNFRSF9Q07011 255 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 KIAA0141Q14154 515 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 TATDN3Q17R31 274 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 C12orf45Q8N5I9 185 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 EEF1AKMT3Q96AZ1 226 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 MS4A10Q96PG2 267 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 MCRIP2Q9BUT9 160 aaKnown RBP9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 HEYLQ9NQ87 328 aaPredicted RBP9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 FBXL7Q9UJT9 491 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 U3KQ87 197 aa9.37□□□□□ -0.91
RABGGTA-215ENST00000560207 A0A1B0GW64 132 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 DBX1A6NMT0 343 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 CEBPZOSA8MTT3 80 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 CCL24O00175 119 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 PITX3O75364 302 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 SCGB2A1O75556 95 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 APELAP0DMC3 54 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 ZNF616Q08AN1 781 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 EXOSC2Q13868 293 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 C15orf32Q32M92 178 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 GGNBP1Q5YKI7 109 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 SLC25A24Q6NUK1 477 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 ZNF343Q6P1L6 599 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 TREML4Q6UXN2 200 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 Q6ZRM9 215 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 OR10W1Q8NGF6 305 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 OR1N2Q8NGR9 330 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 TXN2Q99757 166 aa9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 ZMAT5Q9UDW3 170 aaKnown RBP9.36□□□□□ -0.91
RABGGTA-215ENST00000560207 A0A0G2JRQ6 117 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 A0A1W2PRX2 142 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 LINC01619G3V211 115 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 SCAF4O95104 1147 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 HOXB5P09067 269 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 FHL3Q13643 280 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 RGS21Q2M5E4 152 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 ETFRF1Q6IPR1 90 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 LCNL1Q6ZST4 164 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 WFDC9Q8NEX5 89 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 OR11H1Q8NG94 326 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 FANCD2OSQ96PS1 177 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 P2RX4Q99571 388 aa9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 PEF1Q9UBV8 284 aaKnown RBP9.35□□□□□ -0.91
RABGGTA-215ENST00000560207 RPS10-NUDT3A0A1W2PQS6 291 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 OR2J3O76001 311 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 MYOD1P15172 320 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 FCGR2BP31994 310 aaPredicted RBP9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 CYCSP99999 105 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 IZUMO4Q1ZYL8 232 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 BSXQ3C1V8 233 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 C2orf83Q53S99 150 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 PVRIGQ6DKI7 326 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 RNASEH2CQ8TDP1 164 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 DTD1Q8TEA8 209 aa9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 RCC1LQ96I51 464 aaKnown RBP9.34□□□□□ -0.91
RABGGTA-215ENST00000560207 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 WRBO00258 174 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 SYNGR2O43760 224 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 REG1AP05451 166 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 CD33P20138 364 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 NKX2-1P43699 371 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 RAB11AP62491 216 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 ID3Q02535 119 aa9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 IAH1Q2TAA2 248 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-215ENST00000560207 SPSB3Q6PJ21 355 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms