RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 C2orf50Q96LR7 162 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 NOL4LQ96MY1 436 aaPredicted RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 OR4C12Q96R67 309 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TSNAXQ99598 290 aaKnown RBP4.11□□□□□ -1.75
SPG11-220ENST00000559933 PARP11Q9NR21 331 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TMEM14BQ9NUH8 114 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TMEM160Q9NX00 188 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 BET1LQ9NYM9 111 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 KIAA1456Q9P272 454 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 VPREB3Q9UKI3 123 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 TMED3Q9Y3Q3 217 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 OR51B2Q9Y5P1 312 aa4.11□□□□□ -1.75
SPG11-220ENST00000559933 FXYD6-FXYD2A0A087WZ82 144 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 IGHV3-21A0A0B4J1V1 117 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 DUXBA0A1W2PPF3 345 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 BTBD17A6NE02 478 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 MSGN1A6NI15 193 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 CEBPZOSA8MTT3 80 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 G3V318 75 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 WRBO00258 174 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 CRLF1O75462 422 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 IFNA17P01571 189 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 GIPP09681 153 aaPredicted RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 RPL27AP46776 148 aaKnown RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 LGALS7P47929 136 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 COMPP49747 757 aaPredicted RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 UBA52P62987 128 aaKnown RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 CX3CL1P78423 397 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 WT1-ASQ06250 92 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 TNFRSF9Q07011 255 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 FXYD3Q14802 87 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 ECSCRQ19T08 205 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 PPP1R27Q86WC6 154 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 TEX45Q8NA69 505 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 OR2T35Q8NGX2 323 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 TMEM170AQ8WVE7 144 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 SSMEM1Q8WWF3 244 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 SRSF12Q8WXF0 261 aaKnown RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 RASL11BQ9BPW5 248 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 PRDM13Q9H4Q3 707 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 ZNF702PQ9H963 129 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 FAM212BQ9NTI7 297 aaPredicted RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 MBD2Q9UBB5 411 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 HSPB7Q9UBY9 170 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 PAIP2BQ9ULR5 123 aaKnown RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 FOXA2Q9Y261 457 aaPredicted RBP4.1□□□□□ -1.75
SPG11-220ENST00000559933 POMT1Q9Y6A1 747 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 WSB1Q9Y6I7 421 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 S4R3C0 116 aa4.1□□□□□ -1.75
SPG11-220ENST00000559933 NF1P21359 2839 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 A0A1B0GU03 582 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 IGLC7A0M8Q6 106 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 IGSF23A1L1A6 192 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 FAM24AA6NFZ4 105 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 PFDN1O60925 122 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 DEDDO75618 318 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 SNAPC5O75971 98 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 ATG12O94817 140 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 SPDEFO95238 335 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 CNIH1O95406 144 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 MPC2O95563 127 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 IGHV3-48P01763 117 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 IGHV3-23P01764 117 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 HLA-DRB1P01911 266 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 FAM157CP0CG43 387 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 TRAPPC2P0DI81 140 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 TRAPPC2BP0DI82 140 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 NKX2-1P43699 371 aaPredicted RBP4.09□□□□□ -1.75
SPG11-220ENST00000559933 VDAC2P45880 294 aaPredicted RBP4.09□□□□□ -1.75
SPG11-220ENST00000559933 MFAP2P55001 183 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 PAX9P55771 341 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 BPIFB3P59826 476 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 HILS1P60008 231 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 PRCDQ00LT1 54 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 SRSF4Q08170 494 aaKnown RBP4.09□□□□□ -1.75
SPG11-220ENST00000559933 ARL16Q0P5N6 197 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 AANATQ16613 207 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 LFNGQ8NES3 379 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 OR5T1Q8NG75 326 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 OR4A5Q8NH83 315 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 OR5R1Q8NH85 324 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 IL17DQ8TAD2 202 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 VSTM2AQ8TAG5 236 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 DTD1Q8TEA8 209 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 DCUN1D4Q92564 292 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 ARPC1AQ92747 370 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 SPIN2AQ99865 258 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 SPIN2BQ9BPZ2 258 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 RNF126Q9BV68 326 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 NMES1Q9C002 83 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 C11orf1Q9H5F2 150 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 NDUFA4L2Q9NRX3 87 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.09□□□□□ -1.75
SPG11-220ENST00000559933 PRNDQ9UKY0 176 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 DMRT1Q9Y5R6 373 aa4.09□□□□□ -1.75
SPG11-220ENST00000559933 C15orf62A8K5M9 175 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 ARPC5O15511 151 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 FGF16O43320 207 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 SYNGR2O43760 224 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms