RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 FXYD6Q9H0Q3 95 aa8.63□□□□□ -1.03
USP3-214ENST00000559718 DAZ1Q9NQZ3 744 aaKnown RBP8.63□□□□□ -1.03
USP3-214ENST00000559718 C21orf62Q9NYP8 219 aa8.63□□□□□ -1.03
USP3-214ENST00000559718 OR51B2Q9Y5P1 312 aa8.63□□□□□ -1.03
USP3-214ENST00000559718 F11RQ9Y624 299 aaKnown RBP8.63□□□□□ -1.03
USP3-214ENST00000559718 CXorf65A6NEN9 183 aa8.62□□□□□ -1.03
USP3-214ENST00000559718 RPS19P39019 145 aaKnown RBP8.62□□□□□ -1.03
USP3-214ENST00000559718 LSM3P62310 102 aaKnown RBP8.62□□□□□ -1.03
USP3-214ENST00000559718 THOC7Q6I9Y2 204 aaKnown RBP8.62□□□□□ -1.03
USP3-214ENST00000559718 LYG2Q86SG7 212 aa8.62□□□□□ -1.03
USP3-214ENST00000559718 SLC38A6Q8IZM9 456 aa8.62□□□□□ -1.03
USP3-214ENST00000559718 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
USP3-214ENST00000559718 UBAC2Q8NBM4 344 aa8.62□□□□□ -1.03
USP3-214ENST00000559718 OR5H2Q8NGV7 314 aa8.62□□□□□ -1.03
USP3-214ENST00000559718 LINC00476Q8WZB0 136 aa8.62□□□□□ -1.03
USP3-214ENST00000559718 LSM10Q969L4 123 aaKnown RBP8.62□□□□□ -1.03
USP3-214ENST00000559718 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
USP3-214ENST00000559718 GPR31O00270 319 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 NDUFA4O00483 81 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 CYB5BO43169 146 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 SPRY2O43597 315 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 SNAPC5O75971 98 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 CTSDP07339 412 aaPredicted RBP8.61□□□□□ -1.03
USP3-214ENST00000559718 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
USP3-214ENST00000559718 NAT1P18440 290 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 HLA-DMAP28067 261 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 HRH1P35367 487 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 APOC4P55056 127 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 PHLDA2Q53GA4 152 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 Q56UQ5 140 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 UBE2NLQ5JXB2 153 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 TMEM69Q5SWH9 247 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 SPSB3Q6PJ21 355 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 Q6ZWC4 215 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 HSD17B13Q7Z5P4 300 aaPredicted RBP8.61□□□□□ -1.03
USP3-214ENST00000559718 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 LYSMD2Q8IV50 215 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 BORCS5Q969J3 196 aa8.61□□□□□ -1.03
USP3-214ENST00000559718 IGHV3-49A0A0A0MS15 119 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 TMEM127O75204 238 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 LY6G6CO95867 125 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 IGHV3-48P01763 117 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 CTSGP08311 255 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 BMI1P35226 326 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 TAS2R46P59540 309 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 TNFRSF9Q07011 255 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 ZNF124Q15973 351 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 KCTD21Q4G0X4 260 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 LAMTOR1Q6IAA8 161 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 APRG1Q8IVJ8 170 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 CMTM1Q8IZ96 169 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 TSPAN14Q8NG11 270 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 OR6F1Q8NGZ6 308 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 OR5B3Q8NH48 314 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 RNF2Q99496 336 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 KRTAP4-8Q9BYQ9 185 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 PRNDQ9UKY0 176 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
USP3-214ENST00000559718 C15orf61A6NNL5 157 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 K7EMT4 169 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 IGKV1-39P01597 117 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 IGKV1D-39P04432 117 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 EIF4EP06730 217 aaKnown RBP8.59□□□□□ -1.03
USP3-214ENST00000559718 FCGR2BP31994 310 aaPredicted RBP8.59□□□□□ -1.03
USP3-214ENST00000559718 PRSS3P35030 304 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 CEMP1Q6PRD7 247 aaPredicted RBP8.59□□□□□ -1.03
USP3-214ENST00000559718 CROCCP3Q8IVE0 287 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 CADM3Q8N126 398 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 STPG3Q8N7X2 389 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 RNF183Q96D59 192 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 YIPF6Q96EC8 236 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 MISP3Q96FF7 219 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 SMPXQ9UHP9 88 aa8.59□□□□□ -1.03
USP3-214ENST00000559718 IGKV3-7A0A075B6H7 116 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 IGHV3OR16-13A0A075B7E8 117 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 IGHV3-74A0A0B4J1X5 117 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 KIR2DL5BA0A0G2JN68 375 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 KIR2DL5BA0A0G2JPC4 375 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 NUPR2A6NF83 97 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 OR4C46A6NHA9 309 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 I3L2K1 104 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 UBE2CO00762 179 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 CHEK1O14757 476 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 YIF1AO95070 293 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 TFPI2P48307 235 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 TBC1D26Q86UD7 250 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 KIR2DL5AQ8N109 375 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 OR1P1Q8NH06 330 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 GPX8Q8TED1 209 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 SLC25A46Q96AG3 418 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 SEC22AQ96IW7 307 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 TMEM56Q96MV1 263 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 RHPN1-AS1Q9BWJ2 59 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 MAP6D1Q9H9H5 199 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 FKBP11Q9NYL4 201 aa8.58□□□□□ -1.04
USP3-214ENST00000559718 IGHV7-4-1A0A0J9YVY3 117 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms