RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 BPIFB3P59826 476 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 SLC38A11Q08AI6 406 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 TEX261Q6UWH6 196 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 ALKAL2Q6UX46 152 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 Q6ZS46 218 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 SLC51BQ86UW2 128 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 P2RX4Q99571 388 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 GON7Q9BXV9 100 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 DMRT1Q9Y5R6 373 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 U3KQ87 197 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 HLA-DRB1P01911 266 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 EXOSC2Q13868 293 aaKnown RBP13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 PCNPQ8WW12 178 aaKnown RBP13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 ARPC1AQ92747 370 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 DUX5Q96PT3 197 aa13.7□□□□□ -0.22
CHRNA3-206ENST00000559658 LY6G6DO95868 133 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 FAM74A1Q5RGS3 127 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 ZNF562Q6V9R5 426 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 Q71RC1 249 aaPredicted RBP13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 STPG2Q8N412 459 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 OR1S2Q8NGQ3 325 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 RASL11BQ9BPW5 248 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 SH3BGRL3Q9H299 93 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 SLA2Q9H6Q3 261 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 C1RLQ9NZP8 487 aa13.69□□□□□ -0.22
CHRNA3-206ENST00000559658 A0A1W2PN81 502 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 INS-IGF2F8WCM5 200 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 CHRNA7P36544 502 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 RUNX1Q01196 453 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 MLANAQ16655 118 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 Q6YL49 198 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 LILRB2Q8N423 598 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 ZNF680Q8NEM1 530 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 STOML3Q8TAV4 291 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 ATP5SQ99766 215 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
CHRNA3-206ENST00000559658 UBE2L5PA0A1B0GUS4 154 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 ATP6V0E1O15342 81 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 HOXA3O43365 443 aaPredicted RBP13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 IGHV3-48P01763 117 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 PRH1P02810 166 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 IFNA4P05014 189 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 HTR2BP41595 481 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 BLCAPP62952 87 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 SIGLECL1Q8N7X8 197 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 HSD17B11Q8NBQ5 300 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 PARP11Q9NR21 331 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 TAAR5O14804 337 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 C4BPBP20851 252 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 SNCAP37840 140 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 UBA52P62987 128 aaKnown RBP13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 DEFA5Q01523 94 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 AANATQ16613 207 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 C2orf83Q53S99 150 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 LFNGQ8NES3 379 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 OR10P1Q8NGE3 313 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 PLA2G2EQ9NZK7 142 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
CHRNA3-206ENST00000559658 NSD1Q96L73 2696 aaPredicted RBP13.66□□□□□ -0.22
CHRNA3-206ENST00000559658 SRP14P37108 136 aaKnown RBP13.66□□□□□ -0.22
CHRNA3-206ENST00000559658 ERHP84090 104 aaKnown RBP13.66□□□□□ -0.22
CHRNA3-206ENST00000559658 ARSJQ5FYB0 599 aaPredicted RBP13.66□□□□□ -0.22
CHRNA3-206ENST00000559658 TMED6Q8WW62 240 aa13.66□□□□□ -0.22
CHRNA3-206ENST00000559658 RGS13O14921 159 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 FGF16O43320 207 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 HBG1P69891 147 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 HBG2P69892 147 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 C9orf152Q5JTZ5 239 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 BAP18Q8IXM2 172 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 UBAC2Q8NBM4 344 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 FNDC4Q9H6D8 234 aaPredicted RBP13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 IGHV3-21A0A0B4J1V1 117 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 G3V318 75 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 ECSCRQ19T08 205 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 TAF15Q92804 592 aaKnown RBP eCLIP13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 ARV1Q9H2C2 271 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 PRDM13Q9H4Q3 707 aa13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 GSX1Q9H4S2 264 aaPredicted RBP13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 MRPL36Q9P0J6 103 aaKnown RBP13.65□□□□□ -0.22
CHRNA3-206ENST00000559658 HIVEP2P31629 2446 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 TPT1P13693 172 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 CTRB1P17538 263 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 RPP30P78346 268 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 TMEM95Q3KNT9 176 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 CTRB2Q6GPI1 263 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 ZNF114Q8NC26 417 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 PINX1Q96BK5 328 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 RSG1Q9BU20 258 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 TMUB1Q9BVT8 246 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 F11RQ9Y624 299 aaKnown RBP13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 NF1P21359 2839 aa13.64□□□□□ -0.23
CHRNA3-206ENST00000559658 JTBO76095 146 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 LY86O95711 162 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 ATP6V0CP27449 155 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 RAB11AP62491 216 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 VWC2Q2TAL6 325 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 VPREB3Q9UKI3 123 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms