RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 CRYBB3P26998 211 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 TNFAIP6P98066 277 aaPredicted RBP13.54□□□□□ -0.24
SPG11-215ENST00000559193 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 C1orf194Q5T5A4 169 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 SLC25A48Q6ZT89 311 aaKnown RBP13.54□□□□□ -0.24
SPG11-215ENST00000559193 LINC00574Q9H8X3 128 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 TMEM167BQ9NRX6 74 aa13.54□□□□□ -0.24
SPG11-215ENST00000559193 TANC2Q9HCD6 1990 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 ERVFC1-1P60608 527 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 Q6ZWC4 215 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 SLC35D1Q9NTN3 355 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 RPUSD1Q9UJJ7 312 aaKnown RBP13.53□□□□□ -0.24
SPG11-215ENST00000559193 TEX50A0A1B0GTY4 177 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 SERF1AO75920 110 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 ESDP10768 282 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 CRISP2P16562 243 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 CD33P20138 364 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 OR10J1P30954 320 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 IER3P46695 156 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 ZNF788Q6ZQV5 615 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 DCAF16Q9NXF7 216 aa13.53□□□□□ -0.24
SPG11-215ENST00000559193 GNG4P50150 75 aa13.52□□□□□ -0.24
SPG11-215ENST00000559193 C3orf36Q3SXR2 165 aa13.52□□□□□ -0.24
SPG11-215ENST00000559193 SLC35E1Q96K37 410 aa13.52□□□□□ -0.24
SPG11-215ENST00000559193 CBLN4Q9NTU7 201 aa13.52□□□□□ -0.24
SPG11-215ENST00000559193 TECRQ9NZ01 308 aaKnown RBP13.52□□□□□ -0.24
SPG11-215ENST00000559193 IL19Q9UHD0 177 aa13.52□□□□□ -0.24
SPG11-215ENST00000559193 HELTA6NFD8 242 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 GGTLC3B5MD39 225 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 F2Z2F3 143 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 FCN1O00602 326 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 MLANAQ16655 118 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 RTL8BQ17RB0 113 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 C2orf83Q53S99 150 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 PQLC2Q6ZP29 291 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 TGIF2LXQ8IUE1 241 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 OR8I2Q8N0Y5 310 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 TMEM106BQ9NUM4 274 aa13.52□□□□□ -0.25
SPG11-215ENST00000559193 SNURFLB1AK76 121 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 CEACAM4O75871 244 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 SAA1P0DJI8 122 aaPredicted RBP13.51□□□□□ -0.25
SPG11-215ENST00000559193 RNASE2P10153 161 aaKnown RBP13.51□□□□□ -0.25
SPG11-215ENST00000559193 TPPP2P59282 170 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 C22orf34Q6ZV56 151 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 DOLPP1Q86YN1 238 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 OR9G1Q8NH87 305 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 TBX15Q96SF7 602 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 SVILO95425 2214 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 OR7C2O60412 319 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 OR5G3P0C626 314 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 OR10J4P0C629 311 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 ST6GALNAC3Q8NDV1 305 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 RND1Q92730 232 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 SNHG12Q9BXW3 62 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 CFAP47Q6ZTR5 3102 aa13.51□□□□□ -0.25
SPG11-215ENST00000559193 ZNF705FA8MVS1 300 aaPredicted RBP13.5□□□□□ -0.25
SPG11-215ENST00000559193 ZNF705DP0CH99 300 aaPredicted RBP13.5□□□□□ -0.25
SPG11-215ENST00000559193 ZNF705BP0CI00 300 aaPredicted RBP13.5□□□□□ -0.25
SPG11-215ENST00000559193 PAFAH1B2P68402 229 aa13.5□□□□□ -0.25
SPG11-215ENST00000559193 OR10W1Q8NGF6 305 aa13.5□□□□□ -0.25
SPG11-215ENST00000559193 RNASE7Q9H1E1 156 aaKnown RBP13.5□□□□□ -0.25
SPG11-215ENST00000559193 BET1LQ9NYM9 111 aa13.5□□□□□ -0.25
SPG11-215ENST00000559193 TM4SF5O14894 197 aa13.5□□□□□ -0.25
SPG11-215ENST00000559193 ZADH2Q8N4Q0 377 aa13.5□□□□□ -0.25
SPG11-215ENST00000559193 TMEM30BQ3MIR4 351 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 PNKDQ8N490 385 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 OR1L8Q8NGR8 309 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 NUTF2P61970 127 aaKnown RBP13.49□□□□□ -0.25
SPG11-215ENST00000559193 Q0VG73 95 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 FXYD3Q14802 87 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 TPTE2P1Q5T6R2 138 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 C1orf185Q5T7R7 199 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 TOMM20LQ6UXN7 152 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 OR5B3Q8NH48 314 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 HSPB9Q9BQS6 159 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 MRPL20Q9BYC9 149 aaKnown RBP13.49□□□□□ -0.25
SPG11-215ENST00000559193 TNCP24821 2201 aa13.49□□□□□ -0.25
SPG11-215ENST00000559193 IGLV2-8P01709 118 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 RANP62826 216 aaKnown RBP13.48□□□□□ -0.25
SPG11-215ENST00000559193 CD69Q07108 199 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 TEX36Q5VZQ5 186 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 ZNF833PQ6ZTB9 187 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 BAGE3Q86Y29 109 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 BAGE2Q86Y30 109 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 IGF2BP2-AS1Q96M15 143 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 OSTCQ9NRP0 149 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 SPINK4O60575 86 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 CDKN1AP38936 164 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 ATP5IP56385 69 aaPredicted RBP13.48□□□□□ -0.25
SPG11-215ENST00000559193 TAS2R45P59539 299 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 SELENOVP59797 346 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 CX3CL1P78423 397 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 SLC25A33Q9BSK2 321 aa13.48□□□□□ -0.25
SPG11-215ENST00000559193 SUMO1P63165 101 aaKnown RBP13.47□□□□□ -0.25
SPG11-215ENST00000559193 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
SPG11-215ENST00000559193 TIGITQ495A1 244 aa13.47□□□□□ -0.25
SPG11-215ENST00000559193 MORN5Q5VZ52 161 aa13.47□□□□□ -0.25
SPG11-215ENST00000559193 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms