RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 INMT-MINDY4F8WBC2 141 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 H3BUA1 57 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 IGHV3-23P01764 117 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 SULT1A3P0DMM9 295 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 SULT1A4P0DMN0 295 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 RNASE2P10153 161 aaKnown RBP8.41□□□□□ -1.06
TPM1-217ENST00000559108 DEFA1P59665 94 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 DEFA3P59666 94 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 SRPXP78539 464 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 DCTN2Q13561 401 aaKnown RBP8.41□□□□□ -1.06
TPM1-217ENST00000559108 SMCO1Q147U7 214 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 BSXQ3C1V8 233 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 PVRIGQ6DKI7 326 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 C4orf3Q8WVX3 66 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 UBE2E2Q96LR5 201 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 CCDC140Q96MF4 163 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 TMEM68Q96MH6 324 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 SRSF8Q9BRL6 282 aaKnown RBP8.41□□□□□ -1.06
TPM1-217ENST00000559108 RBKSQ9H477 322 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 PALMDQ9NP74 551 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.41□□□□□ -1.06
TPM1-217ENST00000559108 ZNF355PQ9NSJ1 428 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 HSPB7Q9UBY9 170 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 F11RQ9Y624 299 aaKnown RBP8.41□□□□□ -1.06
TPM1-217ENST00000559108 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 A0A1B0GU03 582 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 INS-IGF2F8WCM5 200 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 ATG12O94817 140 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 PTTG1O95997 202 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 TNFRSF9Q07011 255 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 FHL3Q13643 280 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 PRR31Q5SQ13 230 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 PLET1Q6UQ28 207 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 C12orf45Q8N5I9 185 aaPredicted RBP8.4□□□□□ -1.06
TPM1-217ENST00000559108 ZNF114Q8NC26 417 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 OR4D5Q8NGN0 318 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 OR52E5Q8NH55 327 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 SLA2Q9H6Q3 261 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 PLEKHA3Q9HB20 300 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 ZFP57Q9NU63 452 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 MRPL36Q9P0J6 103 aaKnown RBP8.4□□□□□ -1.06
TPM1-217ENST00000559108 FBXL7Q9UJT9 491 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 TMED3Q9Y3Q3 217 aa8.4□□□□□ -1.06
TPM1-217ENST00000559108 C7orf66A4D0T2 115 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 NUDT19A8MXV4 375 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 K7EIM0 57 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 TMEM50AO95807 157 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 IFNA17P01571 189 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 IGHV3-48P01763 117 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 LGALS1P09382 135 aaKnown RBP8.39□□□□□ -1.07
TPM1-217ENST00000559108 SPCS3P61009 180 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 RUNX1Q01196 453 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 C15orf32Q32M92 178 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 THOC7Q6I9Y2 204 aaKnown RBP8.39□□□□□ -1.07
TPM1-217ENST00000559108 ZNF343Q6P1L6 599 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 TMEM65Q6PI78 240 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 MRPL41Q8IXM3 137 aaKnown RBP8.39□□□□□ -1.07
TPM1-217ENST00000559108 LINC00482Q8N8I6 264 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 COQ8AQ8NI60 647 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 MAGT1Q9H0U3 335 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 FKBP11Q9NYL4 201 aa8.39□□□□□ -1.07
TPM1-217ENST00000559108 ANKRD34BA5PLL1 514 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 PPP5D1E7EU14 171 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 I3L2K1 104 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 M0QZ24 198 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 SIX6O95475 246 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 SLC25A6P12236 298 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 HOXA1P49639 335 aaPredicted RBP8.38□□□□□ -1.07
TPM1-217ENST00000559108 SLURP1P55000 103 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 IL15RAQ13261 267 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 EXOSC2Q13868 293 aaKnown RBP8.38□□□□□ -1.07
TPM1-217ENST00000559108 OXA1LQ15070 435 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 MLANAQ16655 118 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 TATDN3Q17R31 274 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 NECAP1Q8NC96 275 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 OR11H1Q8NG94 326 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 OR1S1Q8NH92 325 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 C11orf1Q9H5F2 150 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 FNDC4Q9H6D8 234 aaPredicted RBP8.38□□□□□ -1.07
TPM1-217ENST00000559108 RCL1Q9Y2P8 373 aaKnown RBP8.38□□□□□ -1.07
TPM1-217ENST00000559108 ALG5Q9Y673 324 aa8.38□□□□□ -1.07
TPM1-217ENST00000559108 FAM223BA6NKX1 122 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 CEBPZOSA8MTT3 80 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 CCL24O00175 119 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 BMPR1BO00238 502 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 IAPPP10997 89 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 EDN2P20800 178 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 PAX9P55771 341 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 POLR2GP62487 172 aaKnown RBP eCLIP8.37□□□□□ -1.07
TPM1-217ENST00000559108 ID3Q02535 119 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 SLC25A24Q6NUK1 477 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 HSD17B13Q7Z5P4 300 aaPredicted RBP8.37□□□□□ -1.07
TPM1-217ENST00000559108 FAM223AQ8IWN6 122 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 ZBTB8BQ8NAP8 495 aaPredicted RBP8.37□□□□□ -1.07
TPM1-217ENST00000559108 UXS1Q8NBZ7 420 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 OR1N2Q8NGR9 330 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 OR1P1Q8NH06 330 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 ZNF502Q8TBZ5 544 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 SCARB1Q8WTV0 552 aa8.37□□□□□ -1.07
TPM1-217ENST00000559108 OR4C12Q96R67 309 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms