RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PLXNA3P51805 1871 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 DISP1Q96F81 1524 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 TRAV9-1A0A075B6T8 112 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 A0A087WUJ7 227 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 TRAV26-2A0A0B4J265 109 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 DPRXA6NFQ7 191 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 SMIM9A6NGZ8 99 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 FAAHO00519 579 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 PIRO00625 290 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 PGLYRP1O75594 196 aaPredicted RBP1.78□□□□□ -2.12
CASC4-206ENST00000558847 HAND1O96004 215 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 RBP1P09455 135 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 TRGC1P0CF51 173 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 KRTAP12-4P60329 112 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 CDK10Q15131 360 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 KCNJ8Q15842 424 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 SLC36A1Q7Z2H8 476 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 RPS19BP1Q86WX3 136 aaKnown RBP1.78□□□□□ -2.12
CASC4-206ENST00000558847 CT55Q8WUE5 264 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 ITFG2Q969R8 447 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 PRAP1Q96NZ9 151 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 CCDC90BQ9GZT6 254 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 PKIGQ9Y2B9 76 aa1.78□□□□□ -2.12
CASC4-206ENST00000558847 VWDEQ8N2E2 1590 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 WRNQ14191 1432 aaPredicted RBP eCLIP1.77□□□□□ -2.13
CASC4-206ENST00000558847 MTUS2Q5JR59 1369 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 EXOC1LA0A1B0GW35 172 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 SDCBPO00560 298 aaPredicted RBP1.77□□□□□ -2.13
CASC4-206ENST00000558847 FADS1O60427 444 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 RPS4Y1P22090 263 aaKnown RBP1.77□□□□□ -2.13
CASC4-206ENST00000558847 AKR1C3P42330 323 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 ZNF80P51504 273 aaPredicted RBP1.77□□□□□ -2.13
CASC4-206ENST00000558847 TMED2Q15363 201 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 FAM27BQ5VT28 67 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 OOSP2Q86WS3 158 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 COA5Q86WW8 74 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 OR5B17Q8NGF7 314 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 KLK6Q92876 244 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 TMEM106AQ96A25 262 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 SCGB3A1Q96QR1 104 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 TMEM147Q9BVK8 224 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 TLNRD1Q9H1K6 362 aa1.77□□□□□ -2.13
CASC4-206ENST00000558847 NMNAT1Q9HAN9 279 aaPredicted RBP1.77□□□□□ -2.13
CASC4-206ENST00000558847 SCAF11Q99590 1463 aaKnown RBP1.76□□□□□ -2.13
CASC4-206ENST00000558847 ORC5O43913 435 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 IFNA6P05013 189 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 ELOBQ15370 118 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 KRTAP21-3Q3LHN1 58 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 TMEM155Q4W5P6 130 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 KRT222Q8N1A0 295 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 OR8B3Q8NGG8 313 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 MBD3L1Q8WWY6 194 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 ARL2BPQ9Y2Y0 163 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 STRCP1A6NGW2 1772 aa1.76□□□□□ -2.13
CASC4-206ENST00000558847 RTL1A6NKG5 1358 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 MDC1Q14676 2089 aaKnown RBP1.75□□□□□ -2.13
CASC4-206ENST00000558847 TRGV2A0A075B6R0 118 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 hADV38S2A0JD32 116 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 C19orf84I3L1E1 186 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 J3QRK9 145 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 PDE6DO43924 150 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 ZNF737O75373 536 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 ATP5HO75947 161 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 CNIH1O95406 144 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 SMIM10L2AP0DMW4 78 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 SMIM10L2BP0DMW5 78 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 EIF2B2P49770 351 aaKnown RBP1.75□□□□□ -2.13
CASC4-206ENST00000558847 ERVS71-1P61550 626 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 DHFR2Q86XF0 187 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 GDPD1Q8N9F7 314 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 HSPB9Q9BQS6 159 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 KIFC1Q9BW19 673 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 C11orf68Q9H3H3 251 aaKnown RBP1.75□□□□□ -2.13
CASC4-206ENST00000558847 SLC39A9Q9NUM3 307 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 CKLFQ9UBR5 152 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 PRELID3BQ9Y3B1 194 aa1.75□□□□□ -2.13
CASC4-206ENST00000558847 A0A0D9SG52 128 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 CIAO1O76071 339 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 IGKV1-5P01602 117 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 SERPINE1P05121 402 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 AQP4P55087 323 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 RPS20P60866 119 aaKnown RBP1.74□□□□□ -2.13
CASC4-206ENST00000558847 KIAA2026Q5HYC2 2103 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 C7orf65Q6ZTY9 151 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 MIR17HGQ75NE6 70 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 AAED1Q7RTV5 226 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 DEFB128Q7Z7B8 93 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 H1FXQ92522 213 aaKnown RBP1.74□□□□□ -2.13
CASC4-206ENST00000558847 C2orf50Q96LR7 162 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 NAA38Q9BRA0 125 aaKnown RBP1.74□□□□□ -2.13
CASC4-206ENST00000558847 GINS4Q9BRT9 223 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 YIPF3Q9GZM5 350 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 BAIAP2Q9UQB8 552 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 DOCK10Q96BY6 2186 aa1.74□□□□□ -2.13
CASC4-206ENST00000558847 FUOMA2VDF0 154 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 TRAPPC13A5PLN9 417 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 OR2B3O76000 313 aa1.73□□□□□ -2.13
CASC4-206ENST00000558847 OR7C1O76099 320 aaPredicted RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms