RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RPEL1Q2QD12 228 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 ZNF57Q68EA5 555 aaPredicted RBP9.6□□□□□ -0.87
SLIRP-211ENST00000557623 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 OR1L6Q8NGR2 347 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 RNASE11Q8TAA1 199 aaKnown RBP9.6□□□□□ -0.87
SLIRP-211ENST00000557623 EEF1AKMT3Q96AZ1 226 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 CXorf58Q96LI9 332 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 TMEM222Q9H0R3 208 aa9.6□□□□□ -0.87
SLIRP-211ENST00000557623 TRBV7-1A0A0A6YYK4 115 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 SAP30O75446 220 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 NDUFB8O95169 186 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 IGKV1-5P01602 117 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 KRTAP10-11P60412 298 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 HSPE1P61604 102 aaKnown RBP9.59□□□□□ -0.87
SLIRP-211ENST00000557623 PRCDQ00LT1 54 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 WT1-ASQ06250 92 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 KLF5Q13887 457 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-211ENST00000557623 TRIQKQ629K1 86 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 FAM219AQ8IW50 185 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 MRAPQ8TCY5 172 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 GLYATL2Q8WU03 294 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 RBPMSQ93062 196 aaKnown RBP9.59□□□□□ -0.87
SLIRP-211ENST00000557623 OR4C12Q96R67 309 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 SLC25A21Q9BQT8 299 aaPredicted RBP9.59□□□□□ -0.87
SLIRP-211ENST00000557623 PDCD10Q9BUL8 212 aa9.59□□□□□ -0.87
SLIRP-211ENST00000557623 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
SLIRP-211ENST00000557623 PIGBOS1A0A0B4J2F0 54 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 NAP1L6A6NFF2 107 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 DBX1A6NMT0 343 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 TRBV12-3P01733 135 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 P0C879 139 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 ANXA3P12429 323 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
SLIRP-211ENST00000557623 SLC25A24Q6NUK1 477 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 C19orf35Q6ZS72 473 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 GALNT14Q96FL9 552 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 PLEKHA3Q9HB20 300 aa9.58□□□□□ -0.88
SLIRP-211ENST00000557623 NOTCH1P46531 2555 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 BMPR1BO00238 502 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 GGCTO75223 188 aaKnown RBP9.57□□□□□ -0.88
SLIRP-211ENST00000557623 AKR1C4P17516 323 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 SYNJ2BPP57105 145 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 SRPXP78539 464 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 DCTN2Q13561 401 aaKnown RBP9.57□□□□□ -0.88
SLIRP-211ENST00000557623 BAK1Q16611 211 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 LINC00299Q6ZSB3 139 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 SELENOHQ8IZQ5 122 aaKnown RBP9.57□□□□□ -0.88
SLIRP-211ENST00000557623 OR2C3Q8N628 320 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 SLC35G3Q8N808 338 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 OR9G4Q8NGQ1 327 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 VN1R17PQ8TDU5 208 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 IL22RA2Q969J5 263 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 TMEM230Q96A57 120 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 PEMTQ9UBM1 199 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 TMEM56-RWDD3S4R434 201 aa9.57□□□□□ -0.88
SLIRP-211ENST00000557623 A0A0B4J293 547 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 CENPXA8MT69 81 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 ST8SIA3O43173 380 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 IFNA17P01571 189 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 ARL3P36405 182 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 TMEM187Q14656 261 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 RBMS2Q15434 407 aaKnown RBP9.56□□□□□ -0.88
SLIRP-211ENST00000557623 IZUMO4Q1ZYL8 232 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 TMEM128Q5BJH2 165 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 TMED4Q7Z7H5 227 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 ZNF114Q8NC26 417 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 OR1P1Q8NH06 330 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 LHFPL5Q8TAF8 219 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 CCDC140Q96MF4 163 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 C7orf50Q9BRJ6 194 aaKnown RBP9.56□□□□□ -0.88
SLIRP-211ENST00000557623 ENY2Q9NPA8 101 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-211ENST00000557623 CACFD1Q9UGQ2 172 aa9.56□□□□□ -0.88
SLIRP-211ENST00000557623 A0A0G2JRQ6 117 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 MFSD2BA6NFX1 497 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 PPP5D1E7EU14 171 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 INS-IGF2F8WCM5 200 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 IGHV3-23P01764 117 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 GPHB5Q86YW7 130 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 LGI3Q8N145 548 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 OR52E5Q8NH55 327 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 ZNF502Q8TBZ5 544 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 SDHCQ99643 169 aaPredicted RBP9.55□□□□□ -0.88
SLIRP-211ENST00000557623 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
SLIRP-211ENST00000557623 DMRT1Q9Y5R6 373 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 S4R3C0 116 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 MEGF8Q7Z7M0 2845 aa9.55□□□□□ -0.88
SLIRP-211ENST00000557623 A0A0B4J2A0 478 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 TMEM238LA0A1B0GVL6 79 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 WI2-2373I1.2A0A1W2PRP0 233 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 K7EIL1 84 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 CLEC3BP05452 202 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 IL7P13232 177 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 SNCAP37840 140 aa9.54□□□□□ -0.88
SLIRP-211ENST00000557623 HOXA1P49639 335 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms