RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 FAM90A9PA6NNJ1 464 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 LINC00473A8K010 186 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 TEX46H3BTG2 121 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 J3QR06 171 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 TXNL1O43396 289 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 RAMP3O60896 148 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 PROP1O75360 226 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 S1PR2O95136 353 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 CEACAM3P40198 252 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 GNG10P50151 68 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 SULT1A1P50225 295 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 RAB5CP51148 216 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 DYNLT3P51808 116 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 ZNF816Q0VGE8 651 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-230ENST00000557427 IZUMO4Q1ZYL8 232 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 HLA-DRB5Q30154 266 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 TCTEX1D4Q5JR98 221 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 TPTE2P1Q5T6R2 138 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 STX12Q86Y82 276 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 ZNF439Q8NDP4 499 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 LINC00052Q96N35 136 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 ABHD14AQ9BUJ0 271 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 PRSS22Q9GZN4 317 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.87□□□□□ -0.83
SHMT2-230ENST00000557427 PLA2G2EQ9NZK7 142 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 HSPB7Q9UBY9 170 aa9.87□□□□□ -0.83
SHMT2-230ENST00000557427 STRAPQ9Y3F4 350 aaKnown RBP9.87□□□□□ -0.83
SHMT2-230ENST00000557427 LSM4Q9Y4Z0 139 aaKnown RBP9.87□□□□□ -0.83
SHMT2-230ENST00000557427 A0A087X0M5 115 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 A0A1B0GX30 115 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 LY6LH3BQJ8 138 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 DFFBO76075 338 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 NXPH3O95157 252 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 HPRT1P00492 218 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 PF4V1P10720 104 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 G6PCP35575 357 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 ZNF134P52741 427 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 PJVKQ0ZLH3 352 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 OR2B11Q5JQS5 317 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 PXDC1Q5TGL8 231 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 H2BFWTQ7Z2G1 175 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 OR5C1Q8NGR4 320 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 ADTRPQ96IZ2 230 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 PSENENQ9NZ42 101 aa9.86□□□□□ -0.83
SHMT2-230ENST00000557427 SH2D7A6NKC9 451 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-230ENST00000557427 M0R1X1 148 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 LY86O95711 162 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 KRASP01116 189 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 PF4P02776 101 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 THBS3P49746 956 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 TNFRSF9Q07011 255 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 DIAPH2-AS1Q14236 149 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 HNF4GQ14541 408 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 AARDQ4LEZ3 155 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 CT45A1Q5HYN5 189 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 BTNL8Q6UX41 500 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 OR10X1Q8NGY0 326 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 CT45A3Q8NHU0 189 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 LYPD6BQ8NI32 183 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 DDB2Q92466 427 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 RPEQ96AT9 228 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 GNPNAT1Q96EK6 184 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-230ENST00000557427 TSNAXQ99598 290 aaKnown RBP9.85□□□□□ -0.83
SHMT2-230ENST00000557427 ATP5SQ99766 215 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 RBKSQ9H477 322 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 CACFD1Q9UGQ2 172 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 PRELID3BQ9Y3B1 194 aa9.85□□□□□ -0.83
SHMT2-230ENST00000557427 SLC31A2O15432 143 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 CST7O76096 145 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 F2RL1P55085 397 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 UBE2KP61086 200 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 CLINT1Q14677 625 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 TMEM95Q3KNT9 176 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 C9orf152Q5JTZ5 239 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 ADAMTSL5Q6ZMM2 481 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 Q6ZRG5 221 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 COMMD1Q8N668 190 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 LINC00482Q8N8I6 264 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 HSD17B11Q8NBQ5 300 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 S1PR3Q99500 378 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 ZNF251Q9BRH9 671 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 SLC25A33Q9BSK2 321 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 AMMECR1Q9Y4X0 333 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-230ENST00000557427 RYR1P21817 5038 aa9.84□□□□□ -0.83
SHMT2-230ENST00000557427 MARCH11A6NNE9 402 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 FCGR3BO75015 233 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 SCAF4O95104 1147 aaKnown RBP9.83□□□□□ -0.84
SHMT2-230ENST00000557427 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 IAPPP10997 89 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 VDAC2P45880 294 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-230ENST00000557427 REG1BP48304 166 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 HBG1P69891 147 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 HBG2P69892 147 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 HES1Q14469 280 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 RPL39P5Q59GN2 51 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 ZFAND6Q6FIF0 208 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 CCDC144NLQ6NUI1 221 aa9.83□□□□□ -0.84
SHMT2-230ENST00000557427 TMEM14EPQ6UXP3 125 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms