RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 H3BP45 60 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 J3QT63 122 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 GYPAP02724 150 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 MMP7P09237 267 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 CCL3P10147 92 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 ARR3P36575 388 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 TNFSF10P50591 281 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 FGF8P55075 233 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 TPPP2P59282 170 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 ERVS71-1P61550 626 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 GNG3P63215 75 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 TNFRSF9Q07011 255 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 CATR1Q13166 79 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 TRA2AQ13595 282 aaKnown RBP eCLIP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 SPANXN5Q5MJ07 72 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 TMEM14EPQ6UXP3 125 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 FAM58AQ8N1B3 248 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 RPP25LQ8N5L8 163 aaKnown RBP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 STPG4Q8N801 248 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 NHLRC2Q8NBF2 726 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 OR10P1Q8NGE3 313 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 OR10G9Q8NGN4 311 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 OR10G7Q8NGN6 311 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 OR4F5Q8NH21 305 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 OR51H1Q8NH63 302 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 OR4F4Q96R69 305 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 KCNIP2Q9NS61 270 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 FKBP11Q9NYL4 201 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 KCNIP1Q9NZI2 227 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 NAGKQ9UJ70 344 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 FUT9Q9Y231 359 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 CBY1Q9Y3M2 126 aa3.83□□□□□ -1.8
ATXN3-246ENST00000557030 RBM7Q9Y580 266 aaKnown RBP3.83□□□□□ -1.8
ATXN3-246ENST00000557030 SDK1Q7Z5N4 2213 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 FREM3P0C091 2139 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 IGKV3D-15A0A087WSY6 115 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 A0A0G2JMM0 328 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 MDFIC2A0A1B0GVS7 189 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 A0A1W2PPB8 328 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 A0A1W2PRS3 328 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 KIR3DP1A8MWS1 328 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 C11orf94C9JXX5 98 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 RAB29O14966 203 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 MLNRO43193 412 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 TNFSF12O43508 249 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 CXCL13O43927 109 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 ZG16O60844 167 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 SS18L1O75177 396 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-246ENST00000557030 MPDU1O75352 247 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 MRPL33O75394 65 aaKnown RBP3.82□□□□□ -1.8
ATXN3-246ENST00000557030 CLDN1O95832 211 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 KRASP01116 189 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 IGKV1-39P01597 117 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 IGKV1-5P01602 117 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 IGKV1D-39P04432 117 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 LINC00614P0C842 121 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 GZMHP20718 246 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 CDKN1AP38936 164 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 CDC34P49427 236 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-246ENST00000557030 GPM6AP51674 278 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 TDGF1P3P51864 188 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 MLF1P58340 268 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 B3GALT5-AS1P59052 145 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 P2RY6Q15077 328 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 IGFBP7Q16270 282 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 TMEM183BQ1AE95 376 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 VWC2Q2TAL6 325 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 COX19Q49B96 90 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 FFAR4Q5NUL3 377 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 DCAF10Q5QP82 559 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 SSX7Q7RTT5 188 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 NUFIP2Q7Z417 695 aaKnown RBP3.82□□□□□ -1.8
ATXN3-246ENST00000557030 WDR31Q8NA23 367 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 NECAP1Q8NC96 275 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 OR10D3Q8NH80 312 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 TMEM37Q8WXS4 190 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 OR5P3Q8WZ94 311 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 RAB1CQ92928 201 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 C17orf77Q96MU5 243 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 RBM14Q96PK6 669 aaKnown RBP3.82□□□□□ -1.8
ATXN3-246ENST00000557030 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-246ENST00000557030 TAAR6Q96RI8 345 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 C20orf144Q9BQM9 153 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 SPXQ9BT56 116 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 VSIRQ9H7M9 311 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 SLC25A22Q9H936 323 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 MTCH1Q9NZJ7 389 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 IL17BQ9UHF5 180 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 SH3BGRL2Q9UJC5 107 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 POLDIP2Q9Y2S7 368 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 TRAPPC1Q9Y5R8 145 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 PXMP4Q9Y6I8 212 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 LY96Q9Y6Y9 160 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 TEP1Q99973 2627 aaKnown RBP3.82□□□□□ -1.8
ATXN3-246ENST00000557030 PI4KAP42356 2102 aa3.82□□□□□ -1.8
ATXN3-246ENST00000557030 ASCC3Q8N3C0 2202 aaKnown RBP3.81□□□□□ -1.8
ATXN3-246ENST00000557030 LAMA1P25391 3075 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms