RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 DEFA4P12838 97 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 CTRB1P17538 263 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 HTR2BP41595 481 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 BCAP31P51572 246 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 S100A10P60903 97 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 RAP2BP61225 183 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 RPL23AP62750 156 aaKnown RBP7.64□□□□□ -1.19
TMEM260-213ENST00000556929 VAMP2P63027 116 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 WT1-ASQ06250 92 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 FGL1Q08830 312 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 IL15RAQ13261 267 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 RAB32Q13637 225 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 ASPHD1Q5U4P2 390 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 CTRB2Q6GPI1 263 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 NOXA1Q86UR1 476 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 OR2C3Q8N628 320 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 COMMD1Q8N668 190 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 OR5T1Q8NG75 326 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 CHAC2Q8WUX2 184 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 TAF15Q92804 592 aaKnown RBP eCLIP7.64□□□□□ -1.19
TMEM260-213ENST00000556929 RAB40CQ96S21 281 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 ZNF355PQ9NSJ1 428 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 RCL1Q9Y2P8 373 aaKnown RBP7.64□□□□□ -1.19
TMEM260-213ENST00000556929 U3KQ87 197 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 MTORP42345 2549 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 TMEM89A2RUT3 159 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 SSSCA1O60232 199 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 FBXO24O75426 580 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 IFNA10P01566 189 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 REG1AP05451 166 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 IAPPP10997 89 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 AREGP15514 252 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 HIST1H1BP16401 226 aaKnown RBP7.63□□□□□ -1.19
TMEM260-213ENST00000556929 MDKP21741 143 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-213ENST00000556929 PPIFP30405 207 aaKnown RBP7.63□□□□□ -1.19
TMEM260-213ENST00000556929 ATP5IP56385 69 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-213ENST00000556929 RAB11AP62491 216 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 LRRC37A5PQ49AS3 106 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 C19orf54Q5BKX5 351 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 TEX38Q6PEX7 206 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 TMEM65Q6PI78 240 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 KLHDC1Q8N7A1 406 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 ZNF114Q8NC26 417 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 SLC24A4Q8NFF2 622 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 PPP1R1CQ8WVI7 109 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 TMEM158Q8WZ71 300 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 SMIM8Q96KF7 97 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 WNT10AQ9GZT5 417 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 SLA2Q9H6Q3 261 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 PSENENQ9NZ42 101 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 THYN1Q9P016 225 aa7.63□□□□□ -1.19
TMEM260-213ENST00000556929 A0A1B0GVG6 124 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 E5RGE8 158 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 CORTO00230 105 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 CCNKO75909 580 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 BRI3O95415 125 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 MPC2O95563 127 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 IGLV1-40P01703 118 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 IGHG4P01861 327 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 ELANEP08246 267 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 PF4V1P10720 104 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 TAS2R30P59541 319 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 CD83Q01151 205 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 CFHR3Q02985 330 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 KRTAP24-1Q3LI83 254 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 C2orf83Q53S99 150 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 SLC25A24Q6NUK1 477 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 ZNF329Q86UD4 541 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 OR5AU1Q8NGC0 362 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 OR4X2Q8NGF9 303 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 OR1P1Q8NH06 330 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 THAP6Q8TBB0 222 aa7.62□□□□□ -1.19
TMEM260-213ENST00000556929 STRAPQ9Y3F4 350 aaKnown RBP7.62□□□□□ -1.19
TMEM260-213ENST00000556929 F11RQ9Y624 299 aaKnown RBP7.62□□□□□ -1.19
TMEM260-213ENST00000556929 SOX15O60248 233 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 TSC22D2O75157 780 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 DEDDO75618 318 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 SCAF4O95104 1147 aaKnown RBP7.61□□□□□ -1.19
TMEM260-213ENST00000556929 TRGV3P03979 118 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 OR8U8P0C7N1 319 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 RNASE2P10153 161 aaKnown RBP7.61□□□□□ -1.19
TMEM260-213ENST00000556929 NPY1RP25929 384 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 PROK1P58294 105 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 FOXE3Q13461 319 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 BSXQ3C1V8 233 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 SPANXN5Q5MJ07 72 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 PRSS54Q6PEW0 395 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 AKAP14Q86UN6 197 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 OR2T35Q8NGX2 323 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 WDR89Q96FK6 387 aaPredicted RBP7.61□□□□□ -1.19
TMEM260-213ENST00000556929 MS4A10Q96PG2 267 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 P2RX4Q99571 388 aa7.61□□□□□ -1.19
TMEM260-213ENST00000556929 PAIP2BQ9ULR5 123 aaKnown RBP7.61□□□□□ -1.19
TMEM260-213ENST00000556929 TEP1Q99973 2627 aaKnown RBP7.61□□□□□ -1.19
TMEM260-213ENST00000556929 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.19
TMEM260-213ENST00000556929 IGLV11-55A0A075B6I3 123 aa7.6□□□□□ -1.19
TMEM260-213ENST00000556929 A0A0G2JLM5 398 aa7.6□□□□□ -1.19
TMEM260-213ENST00000556929 FAM223BA6NKX1 122 aa7.6□□□□□ -1.19
TMEM260-213ENST00000556929 H3BP45 60 aa7.6□□□□□ -1.19
TMEM260-213ENST00000556929 OR2J3O76001 311 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms