RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 SLC25A42Q86VD7 318 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 OR52B4Q8NGK2 314 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 OR1L8Q8NGR8 309 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 DCUN1D4Q92564 292 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 DLX4Q92988 240 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-222ENST00000556778 RBPMSQ93062 196 aaKnown RBP6.78□□□□□ -1.32
PRKCH-222ENST00000556778 GALNT14Q96FL9 552 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 SCGB3A2Q96PL1 93 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 SLC25A21Q9BQT8 299 aaPredicted RBP6.78□□□□□ -1.32
PRKCH-222ENST00000556778 SLA2Q9H6Q3 261 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 ZC4H2Q9NQZ6 224 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 PRNDQ9UKY0 176 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 KCNIP3Q9Y2W7 256 aa6.78□□□□□ -1.32
PRKCH-222ENST00000556778 IGLV11-55A0A075B6I3 123 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 TRAV6A0A075B6T7 132 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 NAP1L6A6NFF2 107 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 MFSD2BA6NFX1 497 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 MPTX1A8MV57 137 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 PPP5D1E7EU14 171 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 H3BUA1 57 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 SFT2D2O95562 160 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 IGHV3-48P01763 117 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 HSPB1P04792 205 aaKnown RBP6.77□□□□□ -1.33
PRKCH-222ENST00000556778 DEFA4P12838 97 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 HOXD3P31249 432 aaPredicted RBP6.77□□□□□ -1.33
PRKCH-222ENST00000556778 KRTAP10-11P60412 298 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 UBE2MP61081 183 aaKnown RBP6.77□□□□□ -1.33
PRKCH-222ENST00000556778 HSPE1P61604 102 aaKnown RBP6.77□□□□□ -1.33
PRKCH-222ENST00000556778 RUNX1Q01196 453 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 ZNF616Q08AN1 781 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 ZNF846Q147U1 533 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 RBMS2Q15434 407 aaKnown RBP6.77□□□□□ -1.33
PRKCH-222ENST00000556778 C15orf32Q32M92 178 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 TMEM128Q5BJH2 165 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 SLC25A24Q6NUK1 477 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 ZNF343Q6P1L6 599 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 FAM219AQ8IW50 185 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 CADM3Q8N126 398 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 CENPSQ8N2Z9 138 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 NECAP1Q8NC96 275 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 RNASE11Q8TAA1 199 aaKnown RBP6.77□□□□□ -1.33
PRKCH-222ENST00000556778 S100ZQ8WXG8 99 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 RRNAD1Q96FB5 475 aaKnown RBP6.77□□□□□ -1.33
PRKCH-222ENST00000556778 CCDC32Q9BV29 185 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 CACNG5Q9UF02 275 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 ZNF257Q9Y2Q1 563 aa6.77□□□□□ -1.33
PRKCH-222ENST00000556778 C9orf170A2RU37 121 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 CENPXA8MT69 81 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 LINC01619G3V211 115 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 ADAP1O75689 374 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 B3GALNT1O75752 331 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 UPK1BO75841 260 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 IFNA17P01571 189 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 TCRBP04435 133 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 HOXB5P09067 269 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 OR4E1P0C645 316 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 EDN2P20800 178 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 SLC6A1P30531 599 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 MECP2P51608 486 aaKnown RBP6.76□□□□□ -1.33
PRKCH-222ENST00000556778 PRCDQ00LT1 54 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 EXOSC2Q13868 293 aaKnown RBP6.76□□□□□ -1.33
PRKCH-222ENST00000556778 MLANAQ16655 118 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 NMSQ5H8A3 153 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 CLEC19AQ6UXS0 136 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 HAPLN4Q86UW8 402 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 ZNF429Q86V71 674 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 OR2C3Q8N628 320 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 OR5B3Q8NH48 314 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 DEDD2Q8WXF8 326 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 DPF1Q92782 380 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 LSM10Q969L4 123 aaKnown RBP6.76□□□□□ -1.33
PRKCH-222ENST00000556778 USMG5Q96IX5 58 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 CCDC140Q96MF4 163 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 TSC22D3Q99576 134 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 FKBP11Q9NYL4 201 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 PEF1Q9UBV8 284 aaKnown RBP6.76□□□□□ -1.33
PRKCH-222ENST00000556778 SELENOKQ9Y6D0 94 aa6.76□□□□□ -1.33
PRKCH-222ENST00000556778 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.75□□□□□ -1.33
PRKCH-222ENST00000556778 A0A0B4J2A0 478 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 A0A0G2JLM5 398 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 FAM223BA6NKX1 122 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 BMPR1BO00238 502 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 OR2C1O95371 312 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 CLEC3BP05452 202 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 FGF2P09038 288 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 DEFA6Q01524 100 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 DHRS2Q13268 280 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 KLK9Q2XQG4 91 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 BEAN1Q3B7T3 259 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 FAM223AQ8IWN6 122 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 LGI3Q8N145 548 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 IL22RA2Q969J5 263 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 C7orf50Q9BRJ6 194 aaKnown RBP6.75□□□□□ -1.33
PRKCH-222ENST00000556778 SRSF8Q9BRL6 282 aaKnown RBP6.75□□□□□ -1.33
PRKCH-222ENST00000556778 WDR12Q9GZL7 423 aaKnown RBP6.75□□□□□ -1.33
PRKCH-222ENST00000556778 C20orf85Q9H1P6 137 aa6.75□□□□□ -1.33
PRKCH-222ENST00000556778 RANGRFQ9HD47 186 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-222ENST00000556778 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-222ENST00000556778 SHPKQ9UHJ6 478 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms