RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 MS4A6AQ9H2W1 248 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 PLCXD1Q9NUJ7 323 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 CLEC5AQ9NY25 188 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 RABAC1Q9UI14 185 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 TBC1D24Q9ULP9 559 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 RRP15Q9Y3B9 282 aaKnown RBP10.06□□□□□ -0.8
ACTN1-219ENST00000556432 F11RQ9Y624 299 aaKnown RBP10.06□□□□□ -0.8
ACTN1-219ENST00000556432 HSPG2P98160 4391 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 PTGES3LE9PB15 166 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 CDK2AP2O75956 126 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 CD5P06127 495 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 CTSGP08311 255 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 TAS2R31P59538 309 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 ARL6IP1Q15041 203 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 C12orf74Q32Q52 190 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 C1orf134Q5TEV5 83 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 FAM90A2PQ658T7 463 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 CNIH2Q6PI25 160 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 OR1L8Q8NGR8 309 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 SCRT1Q9BWW7 348 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 LSM2Q9Y333 95 aaKnown RBP10.05□□□□□ -0.8
ACTN1-219ENST00000556432 X6R8D5 127 aa10.05□□□□□ -0.8
ACTN1-219ENST00000556432 IGHV3-66A0A0C4DH42 116 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 ZNF705EA8MWA4 302 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-219ENST00000556432 K7EIM0 57 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 HPRT1P00492 218 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 GIG44P09565 113 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-219ENST00000556432 SPP1P10451 314 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 RAB6AP20340 208 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 NPY1RP25929 384 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 ERVK-16P61578 105 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 CATR1Q13166 79 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 TRAM1Q15629 374 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 CDNFQ49AH0 187 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 MORN3Q6PF18 240 aaPredicted RBP10.04□□□□□ -0.8
ACTN1-219ENST00000556432 FAM24BQ8N5W8 94 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 NUDCD2Q8WVJ2 157 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 ST8SIA2Q92186 375 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 LSM10Q969L4 123 aaKnown RBP10.04□□□□□ -0.8
ACTN1-219ENST00000556432 DGCR14Q96DF8 476 aaKnown RBP10.04□□□□□ -0.8
ACTN1-219ENST00000556432 OR10C1Q96KK4 312 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 GINS3Q9BRX5 216 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 CCL28Q9NRJ3 127 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 FKBP14Q9NWM8 211 aa10.04□□□□□ -0.8
ACTN1-219ENST00000556432 TEX50A0A1B0GTY4 177 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 KNCNA6PVL3 124 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 RBFOX2O43251 390 aaKnown RBP eCLIP10.03□□□□□ -0.8
ACTN1-219ENST00000556432 C4BPBP20851 252 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 PSMA1P25786 263 aaKnown RBP10.03□□□□□ -0.8
ACTN1-219ENST00000556432 OR10A3P58181 314 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 GNG2P59768 71 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 ZNF773Q6PK81 442 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 Q6ZR54 194 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 Q6ZRM9 215 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 TRPT1Q86TN4 253 aaKnown RBP10.03□□□□□ -0.8
ACTN1-219ENST00000556432 OR13F1Q8NGS4 319 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 OR51H1Q8NH63 302 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 SLC25A46Q96AG3 418 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 MISP3Q96FF7 219 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 DCSTAMPQ9H295 470 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 TMEM14BQ9NUH8 114 aa10.03□□□□□ -0.8
ACTN1-219ENST00000556432 TMEM235A6NFC5 223 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 PDCD5O14737 125 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 ARPC4P59998 168 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 FABP5Q01469 135 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 POU2AF1Q16633 256 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 AADACL3Q5VUY0 350 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 HACD4Q5VWC8 232 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 DUSP18Q8NEJ0 188 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 CCDC90BQ9GZT6 254 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 SLC5A7Q9GZV3 580 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 VCX3BQ9H321 246 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 ANXA10Q9UJ72 324 aa10.02□□□□□ -0.81
ACTN1-219ENST00000556432 IFITM5A6NNB3 132 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 IGHV3-48P01763 117 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 FCGR2CP31995 323 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 MFAP4P55083 255 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 FXYD4P59646 89 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 ACTL10Q5JWF8 245 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 UBE2UQ5VVX9 321 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 STXBP6Q8NFX7 210 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 CNBD2Q96M20 576 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 NXF2Q9GZY0 626 aaKnown RBP10.01□□□□□ -0.81
ACTN1-219ENST00000556432 PLEKHA2Q9HB19 425 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 NDUFA4L2Q9NRX3 87 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 NSG2Q9Y328 171 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 OR51B2Q9Y5P1 312 aa10.01□□□□□ -0.81
ACTN1-219ENST00000556432 AGRNO00468 2067 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 TRAV2A0A0B4J234 112 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 GNG7O60262 68 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 SNAPC5O75971 98 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 APOHP02749 345 aaPredicted RBP10□□□□□ -0.81
ACTN1-219ENST00000556432 CD74P04233 296 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 FGF2P09038 288 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 ZNF688P0C7X2 276 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 MSMO1Q15800 293 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 Q8N1X5 172 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 LILRB2Q8N423 598 aa10□□□□□ -0.81
ACTN1-219ENST00000556432 ZBTB34Q8NCN2 500 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms