RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FKBP11Q9NYL4 201 aa7.43□□□□□ -1.22
SRP54-210ENST00000556380 C13orf42A0A1B0GVH6 325 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 FAM223BA6NKX1 122 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 NDUFB8O95169 186 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 TRBV12-3P01733 135 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 REG1AP05451 166 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 OR8U8P0C7N1 319 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 OR13C7P0DN81 318 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 BTCP35070 178 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 HSPE1P61604 102 aaKnown RBP7.42□□□□□ -1.22
SRP54-210ENST00000556380 TRIM16LQ309B1 348 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 AARDQ4LEZ3 155 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 TRIQKQ629K1 86 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 ZNF429Q86V71 674 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 C1QL4Q86Z23 238 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 FAM223AQ8IWN6 122 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 SGPP2Q8IWX5 399 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 OR4A16Q8NH70 328 aa7.42□□□□□ -1.22
SRP54-210ENST00000556380 KRTAP4-8A0A0G2JLE6 195 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 CENPXA8MT69 81 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 LINC01619G3V211 115 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 OR2J3O76001 311 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 AKR1C4P17516 323 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 INPP1P49441 399 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 CCR6P51684 374 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 SLURP1P55000 103 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 MFAP2P55001 183 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 PRCDQ00LT1 54 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 ATP5G2Q06055 141 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 C15orf32Q32M92 178 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 HSD17B13Q7Z5P4 300 aaPredicted RBP7.41□□□□□ -1.22
SRP54-210ENST00000556380 DCUN1D4Q92564 292 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 DPF1Q92782 380 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 DLX4Q92988 240 aaPredicted RBP7.41□□□□□ -1.22
SRP54-210ENST00000556380 RBPMSQ93062 196 aaKnown RBP7.41□□□□□ -1.22
SRP54-210ENST00000556380 IL22RA2Q969J5 263 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 LSM10Q969L4 123 aaKnown RBP7.41□□□□□ -1.22
SRP54-210ENST00000556380 GPR146Q96CH1 333 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 CCDC32Q9BV29 185 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 RANGRFQ9HD47 186 aaPredicted RBP7.41□□□□□ -1.22
SRP54-210ENST00000556380 PEF1Q9UBV8 284 aaKnown RBP7.41□□□□□ -1.22
SRP54-210ENST00000556380 FBXL7Q9UJT9 491 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 KCNIP3Q9Y2W7 256 aa7.41□□□□□ -1.22
SRP54-210ENST00000556380 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 LINC00854A0A1B0GVQ3 168 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 ANKRD34BA5PLL1 514 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 INS-IGF2F8WCM5 200 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 ST8SIA3O43173 380 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 NDUFB6O95139 128 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 DUS4LO95620 317 aaKnown RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 DHFRP00374 187 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 HIST1H1BP16401 226 aaKnown RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 HOXD3P31249 432 aaPredicted RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 KRTAP10-11P60412 298 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 EGFEM1PQ0D2K5 195 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 KLF5Q13887 457 aaPredicted RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 RBMS2Q15434 407 aaKnown RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 TMEM128Q5BJH2 165 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 TMED4Q7Z7H5 227 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 FAM219AQ8IW50 185 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 OR2C3Q8N628 320 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 RRNAD1Q96FB5 475 aaKnown RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 MCRIP2Q9BUT9 160 aaKnown RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 HINT2Q9BX68 163 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 PRR13Q9NZ81 148 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 CACFD1Q9UGQ2 172 aa7.4□□□□□ -1.22
SRP54-210ENST00000556380 F11RQ9Y624 299 aaKnown RBP7.4□□□□□ -1.22
SRP54-210ENST00000556380 A0A0B4J2A0 478 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 MFSD2BA6NFX1 497 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 BMPR1BO00238 502 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 ANXA3P12429 323 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 DEFA4P12838 97 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 AKR1C2P52895 323 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 RAB25P57735 213 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 UBE2MP61081 183 aaKnown RBP7.39□□□□□ -1.23
SRP54-210ENST00000556380 DEFA6Q01524 100 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 PPP1R1AQ13522 171 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 EXOSC2Q13868 293 aaKnown RBP7.39□□□□□ -1.23
SRP54-210ENST00000556380 ANKRD55Q3KP44 614 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 PDLIM3Q53GG5 364 aaPredicted RBP7.39□□□□□ -1.23
SRP54-210ENST00000556380 NMSQ5H8A3 153 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 TMEM268Q5VZI3 342 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 PVRIGQ6DKI7 326 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 LYZL2Q7Z4W2 148 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 SLC35G3Q8N808 338 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 LRTM2Q8N967 370 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 ZNF114Q8NC26 417 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 OR1P1Q8NH06 330 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 CCDC140Q96MF4 163 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 WDR12Q9GZL7 423 aaKnown RBP7.39□□□□□ -1.23
SRP54-210ENST00000556380 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.39□□□□□ -1.23
SRP54-210ENST00000556380 SHPKQ9UHJ6 478 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 FLVCR2Q9UPI3 526 aa7.39□□□□□ -1.23
SRP54-210ENST00000556380 K7EIM0 57 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 OVOL1O14753 267 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 SFT2D2O95562 160 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 ZP3P21754 424 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 SRPXP78539 464 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 FAM209BQ5JX69 171 aa7.38□□□□□ -1.23
SRP54-210ENST00000556380 IL34Q6ZMJ4 242 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms