RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 ZNF430Q9H8G1 570 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-238ENST00000556288 ZFP57Q9NU63 452 aa3.62□□□□□ -1.83
ATXN3-238ENST00000556288 CCDC59Q9P031 241 aaKnown RBP3.62□□□□□ -1.83
ATXN3-238ENST00000556288 COPZ2Q9P299 210 aa3.62□□□□□ -1.83
ATXN3-238ENST00000556288 MTFP1Q9UDX5 166 aa3.62□□□□□ -1.83
ATXN3-238ENST00000556288 C14orf166Q9Y224 244 aaKnown RBP3.62□□□□□ -1.83
ATXN3-238ENST00000556288 NUBP2Q9Y5Y2 271 aa3.62□□□□□ -1.83
ATXN3-238ENST00000556288 G3V4G9 280 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 CCL24O00175 119 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 TSPAN4O14817 238 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 ARPC1BO15143 372 aaKnown RBP3.61□□□□□ -1.83
ATXN3-238ENST00000556288 NDUFA3O95167 84 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 HPRT1P00492 218 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 IGLV2-23P01705 113 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 PRH1P02810 166 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 PRB2P02812 416 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-238ENST00000556288 REG1AP05451 166 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 SERPINE2P07093 398 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 PRSS2P07478 247 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 AKAIN1P0CW23 69 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 SAA1P0DJI8 122 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-238ENST00000556288 MYOD1P15172 320 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 IGLL1P15814 213 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 NQO2P16083 231 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 AKR1C4P17516 323 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 G6PCP35575 357 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 UBE2KP61086 200 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 DEFA5Q01523 94 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 MEF2DQ14814 521 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 PRSS8Q16651 343 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 TRIM16LQ309B1 348 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 SP6Q3SY56 376 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 SPANXN2Q5MJ10 180 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 H2BFWTQ7Z2G1 175 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 MMD2Q8IY49 270 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 SLC38A6Q8IZM9 456 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 OR11H1Q8NG94 326 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 OR4D10Q8NGI6 311 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 OR1N2Q8NGR9 330 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 OR4A16Q8NH70 328 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 TERB2Q8NHR7 220 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 CD300LFQ8TDQ1 290 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 MOB3AQ96BX8 217 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 COMMD5Q9GZQ3 224 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 SLIRPQ9GZT3 109 aaKnown RBP3.61□□□□□ -1.83
ATXN3-238ENST00000556288 ALX4Q9H161 411 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-238ENST00000556288 RABL2AQ9UBK7 228 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-238ENST00000556288 RABL2BQ9UNT1 228 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 FOXA2Q9Y261 457 aaPredicted RBP3.61□□□□□ -1.83
ATXN3-238ENST00000556288 VSIG4Q9Y279 399 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 NSG2Q9Y328 171 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 S4R3C0 116 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 PKD1L1Q8TDX9 2849 aa3.61□□□□□ -1.83
ATXN3-238ENST00000556288 NOTCH3Q9UM47 2321 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 TRAV3A0A0B4J244 114 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 C3orf85A0A1B0GTC6 90 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 GAGE10A6NGK3 116 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 CBY3A6NI87 242 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 CREBL2O60519 120 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-238ENST00000556288 KBTBD11O94819 623 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 S1PR2O95136 353 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 IGHV3-23P01764 117 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 IGHG4P01861 327 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 IGF1P05019 195 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 CRYGBP07316 175 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 OR9G9P0C7N8 305 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 F2RP25116 425 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 FAUP35544 74 aaKnown RBP3.6□□□□□ -1.83
ATXN3-238ENST00000556288 MYCNOSP40205 109 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 RPL27AP46776 148 aaKnown RBP3.6□□□□□ -1.83
ATXN3-238ENST00000556288 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-238ENST00000556288 AMTP48728 403 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 BCAP31P51572 246 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 PIGPP57054 158 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 RPL8P62917 257 aaKnown RBP3.6□□□□□ -1.83
ATXN3-238ENST00000556288 MRPS10P82664 201 aaKnown RBP3.6□□□□□ -1.83
ATXN3-238ENST00000556288 ATP5G2Q06055 141 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 OXA1LQ15070 435 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 NDUFA5Q16718 116 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 AKIRIN2Q53H80 203 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 C10orf55Q5SWW7 151 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 SERTAD4-AS1Q5TG53 156 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 OR4A47Q6IF82 309 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 SLC25A24Q6NUK1 477 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 Q8N402 240 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 TOMM5Q8N4H5 51 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 ZNF491Q8N8L2 437 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 CCDC71LQ8N9Z2 235 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 OR51S1Q8NGJ8 323 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 OR5M8Q8NGP6 311 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 VSTM2AQ8TAG5 236 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 SRSF12Q8WXF0 261 aaKnown RBP3.6□□□□□ -1.83
ATXN3-238ENST00000556288 RNF125Q96EQ8 232 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 SPIN2AQ99865 258 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 SPIN2BQ9BPZ2 258 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 FXYD6Q9H0Q3 95 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 GNB4Q9HAV0 340 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 PPP1R14DQ9NXH3 145 aa3.6□□□□□ -1.83
ATXN3-238ENST00000556288 SCP2D1Q9UJQ7 156 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms