RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 C6orf62Q9GZU0 229 aaPredicted RBP4.81□□□□□ -1.64
TMEM260-209ENST00000556079 PLEKHA2Q9HB19 425 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 SCPEP1Q9HB40 452 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 COMMD9Q9P000 198 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 MTFP1Q9UDX5 166 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 MLXQ9UH92 298 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 CEPT1Q9Y6K0 416 aa4.81□□□□□ -1.64
TMEM260-209ENST00000556079 IGHV3-49A0A0A0MS15 119 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 ZNF320A2RRD8 509 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 C15orf61A6NNL5 157 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 K7EIM0 57 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 CREBL2O60519 120 aaPredicted RBP4.8□□□□□ -1.64
TMEM260-209ENST00000556079 RAB3DO95716 219 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 CD74P04233 296 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 CLEC3BP05452 202 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 P0C879 139 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 DEFA4P12838 97 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 FOLR2P14207 255 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 MAS1LP35410 378 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 INSL3P51460 131 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 PIGPP57054 158 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 ERVK-16P61578 105 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 IL18Q14116 193 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 MEF2DQ14814 521 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 RNASE10Q5GAN6 216 aaKnown RBP4.8□□□□□ -1.64
TMEM260-209ENST00000556079 SLC25A24Q6NUK1 477 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 BTNL8Q6UX41 500 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 Q6ZRM9 215 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 UBAC2Q8NBM4 344 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 OR4C16Q8NGL9 310 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 OR4A5Q8NH83 315 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 VSTM2AQ8TAG5 236 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 MUC7Q8TAX7 377 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 EEF1AKMT3Q96AZ1 226 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 MISP3Q96FF7 219 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 ELOVL1Q9BW60 279 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 COMMD5Q9GZQ3 224 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 SLIRPQ9GZT3 109 aaKnown RBP4.8□□□□□ -1.64
TMEM260-209ENST00000556079 NDUFA4L2Q9NRX3 87 aa4.8□□□□□ -1.64
TMEM260-209ENST00000556079 CCDC59Q9P031 241 aaKnown RBP4.8□□□□□ -1.64
TMEM260-209ENST00000556079 MRPL36Q9P0J6 103 aaKnown RBP4.8□□□□□ -1.64
TMEM260-209ENST00000556079 IGHV3OR16-13A0A075B7E8 117 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 IGHV3-74A0A0B4J1X5 117 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 A0A0B4J293 547 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 RBMY1BA6NDE4 496 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 RBMY1EA6NEQ0 496 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 TMEM127O75204 238 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 GGCTO75223 188 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 SCAF4O95104 1147 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 SERPINE2P07093 398 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 RBMY1DP0C7P1 496 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 TNFSF8P32971 234 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 CD81P60033 236 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 DCTN2Q13561 401 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 MLANAQ16655 118 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 GUCA2BQ16661 112 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 KLK9Q2XQG4 91 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 DEFB114Q30KQ6 69 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 ZFAND6Q6FIF0 208 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 STEAP1BQ6NZ63 245 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 GSG1LQ6UXU4 331 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 SLC25A42Q86VD7 318 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 FAM219AQ8IW50 185 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 CMTM1Q8IZ96 169 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 SLC38A6Q8IZM9 456 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 TMEM61Q8N0U2 210 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 TMEM229BQ8NBD8 167 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 OR1L8Q8NGR8 309 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 SMIM4Q8WVI0 70 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 AP3S1Q92572 193 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 TMEM230Q96A57 120 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 DIRAS2Q96HU8 199 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 CMTM3Q96MX0 182 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 RCHY1Q96PM5 261 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 ARPC5LQ9BPX5 153 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 RTBDNQ9BSG5 229 aaPredicted RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 RBM38Q9H0Z9 239 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 TMEM14BQ9NUH8 114 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 C19orf73Q9NVV2 129 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 KLK9Q9UKQ9 250 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 F11RQ9Y624 299 aaKnown RBP4.79□□□□□ -1.64
TMEM260-209ENST00000556079 KMT2AQ03164 3969 aa4.79□□□□□ -1.64
TMEM260-209ENST00000556079 AGRNO00468 2067 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 IGHV3-66A0A0C4DH42 116 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 LCE6AA0A183 80 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 C3orf85A0A1B0GTC6 90 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 H0Y980 276 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 GABARAPH6UMI1 98 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 I3L2K1 104 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 ST8SIA3O43173 380 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 TGOLN2O43493 480 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 SNAPC5O75971 98 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 IFNA6P05013 189 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 OR5AC1P0C628 307 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 CBLN1P23435 193 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 ETV6P41212 452 aa4.78□□□□□ -1.64
TMEM260-209ENST00000556079 RPL5P46777 297 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms