RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 TMEM191AQ9H0A3 160 aa6.4□□□□□ -1.39
CHD8-209ENST00000555935 JPT1Q9UK76 154 aa6.4□□□□□ -1.39
CHD8-209ENST00000555935 FOXA2Q9Y261 457 aaPredicted RBP6.4□□□□□ -1.39
CHD8-209ENST00000555935 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 PINLYPA6NC86 204 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 C15orf65H3BRN8 121 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 SMPD2O60906 423 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 OTX2P32243 289 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 CA7P43166 264 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 RPL8P62917 257 aaKnown RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 ACP7Q6ZNF0 438 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 MDP1Q86V88 176 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 NUP35Q8NFH5 326 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 OR4S2Q8NH73 311 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 BCL2L2Q92843 193 aaPredicted RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 MRPL32Q9BYC8 188 aaKnown RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 MS4A6AQ9H2W1 248 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 B4GALT7Q9UBV7 327 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 PEF1Q9UBV8 284 aaKnown RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 USF3Q68DE3 2245 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 OR2T8A6NH00 312 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 DEFB108AA8MXU0 73 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 SYS1-DBNDD2H3BUS1 97 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 PROP1O75360 226 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 CA1P00915 261 aaPredicted RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 C8orf88P0DMB2 117 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 ATP5IP56385 69 aaPredicted RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 HIST1H1AQ02539 215 aaPredicted RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 FAM120AOSQ5T036 256 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 GDF5OSQ5U4N7 250 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 AMMECR1LQ6DCA0 310 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 SPATA12Q7Z6I5 190 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 CLCF1Q9UBD9 225 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 DUSP13Q9UII6 198 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 CHTOPQ9Y3Y2 248 aaKnown RBP6.39□□□□□ -1.39
CHD8-209ENST00000555935 REV3LO60673 3130 aa6.39□□□□□ -1.39
CHD8-209ENST00000555935 TRAV3A0A0B4J244 114 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 MUC21A0A0G2JKD1 596 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 MUC21A0A140T8X8 626 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 A0A1B0GXF2 115 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 GAGE12BA1L429 117 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 OR5AL1P0C617 328 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 HIST1H1EP10412 219 aaKnown RBP6.38□□□□□ -1.39
CHD8-209ENST00000555935 MUC21Q5SSG8 566 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 Q6ZR03 302 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 VKORC1L1Q8N0U8 176 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 OR2T6Q8NHC8 308 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 RFESDQ8TAC1 157 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 FAM168AQ92567 244 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 FAM173AQ9BQD7 235 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 ZNF355PQ9NSJ1 428 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 SDK2Q58EX2 2172 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 KMT2EQ8IZD2 1858 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 WNT9BO14905 357 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 ARF6P62330 175 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 PSG9Q00887 426 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 SMIM21Q3B7S5 101 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 PPP1R32Q7Z5V6 425 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 FAM90A1Q86YD7 464 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 KIR3DL3Q8N743 410 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 NHLRC2Q8NBF2 726 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 SLC25A40Q8TBP6 338 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 PMCHL2Q9BQD1 86 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 SLC25A33Q9BSK2 321 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 SSBP3Q9BWW4 388 aaPredicted RBP6.38□□□□□ -1.39
CHD8-209ENST00000555935 SCRT2Q9NQ03 307 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 CLEC5AQ9NY25 188 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 GNG12Q9UBI6 72 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 SOX21Q9Y651 276 aaPredicted RBP6.38□□□□□ -1.39
CHD8-209ENST00000555935 SZT2Q5T011 3432 aa6.38□□□□□ -1.39
CHD8-209ENST00000555935 AHRRA9YTQ3 701 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 LEPROTL1O95214 131 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 CELA3BP08861 270 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 Q0VFX4 171 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 DDB2Q92466 427 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 ST6GALNAC6Q969X2 333 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 SNRNP40Q96DI7 357 aaKnown RBP6.37□□□□□ -1.39
CHD8-209ENST00000555935 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 CXXC4Q9H2H0 198 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 LOXL2Q9Y4K0 774 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 NCKAP5O14513 1909 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 IGHV3-64DA0A0J9YX35 117 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 HIGD1CA8MV81 97 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 TMEM238C9JI98 176 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 CIDEAO60543 219 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 LIPFP07098 398 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 SEC11AP67812 179 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 HBBP68871 147 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 C11orf53Q8IXP5 236 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 TPRX1Q8N7U7 411 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 SAP25Q8TEE9 199 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 OBP2BQ9NPH6 170 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 MRPS17Q9Y2R5 130 aaKnown RBP6.37□□□□□ -1.39
CHD8-209ENST00000555935 AMMECR1Q9Y4X0 333 aaPredicted RBP6.37□□□□□ -1.39
CHD8-209ENST00000555935 R4GN57 208 aa6.37□□□□□ -1.39
CHD8-209ENST00000555935 IGHV1-24A0A0C4DH33 117 aa6.36□□□□□ -1.39
CHD8-209ENST00000555935 CORTO00230 105 aa6.36□□□□□ -1.39
CHD8-209ENST00000555935 IGLC1P0CG04 106 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms