RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 IFNA4P05014 189 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 IGF1P05019 195 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 HNRNPCP07910 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
SHMT2-220ENST00000555634 EXOSC2Q13868 293 aaKnown RBP8.86□□□□□ -0.99
SHMT2-220ENST00000555634 FBLN7Q53RD9 439 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 ETFRF1Q6IPR1 90 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 ZNF546Q86UE3 836 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 ZNF114Q8NC26 417 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 PINX1Q96BK5 328 aaKnown RBP8.86□□□□□ -0.99
SHMT2-220ENST00000555634 WDR89Q96FK6 387 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-220ENST00000555634 ST6GAL2Q96JF0 529 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 FAM103A1Q9BTL3 118 aaKnown RBP8.86□□□□□ -0.99
SHMT2-220ENST00000555634 NF1P21359 2839 aa8.86□□□□□ -0.99
SHMT2-220ENST00000555634 IGLC7A0M8Q6 106 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 H3BUA1 57 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 ARPC5O15511 151 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 AMY1AP04745 511 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 APELAP0DMC3 54 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 SLC25A4P12235 298 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 MYOD1P15172 320 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 CRIP2P52943 208 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-220ENST00000555634 SLC25A24Q6NUK1 477 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 TMEM65Q6PI78 240 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 STPG2Q8N412 459 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 COMMD1Q8N668 190 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 LFNGQ8NES3 379 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 OR10P1Q8NGE3 313 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 OR10W1Q8NGF6 305 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 OR1P1Q8NH06 330 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 FAM110DQ8TAY7 271 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-220ENST00000555634 RNASEH2CQ8TDP1 164 aaKnown RBP8.85□□□□□ -0.99
SHMT2-220ENST00000555634 SLA2Q9H6Q3 261 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 ESM1Q9NQ30 184 aa8.85□□□□□ -0.99
SHMT2-220ENST00000555634 PLXNB1O43157 2135 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 PSMB11A5LHX3 300 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 SH2D7A6NKC9 451 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-220ENST00000555634 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 REG1AP05451 166 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 AREGP15514 252 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 RPL12P30050 165 aaKnown RBP8.84□□□□□ -0.99
SHMT2-220ENST00000555634 OPRK1P41145 380 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 SULT1A1P50225 295 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 AP2S1P53680 142 aaPredicted RBP8.84□□□□□ -0.99
SHMT2-220ENST00000555634 BLCAPP62952 87 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 NDPQ00604 133 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 WT1-ASQ06250 92 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 IL15RAQ13261 267 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 ZNF345Q14585 488 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 C2orf83Q53S99 150 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 OR4X2Q8NGF9 303 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 OR1S2Q8NGQ3 325 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 MISP3Q96FF7 219 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 NEURL2Q9BR09 285 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 MFFQ9GZY8 342 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 ZNF702PQ9H963 129 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 OR5AC2Q9NZP5 309 aa8.84□□□□□ -0.99
SHMT2-220ENST00000555634 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -0.99
SHMT2-220ENST00000555634 TRAV14DV4A0A0A6YYC5 116 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 A0A0D9SG52 128 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 A0A1B0GUS0 222 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 FAM223BA6NKX1 122 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 HMSDA8MTL9 139 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 FBXO24O75426 580 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 DFFBO76075 338 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 NDUFA7O95182 113 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 METTL15P1P0C7V9 234 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 PF4V1P10720 104 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 LYL1P12980 280 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 OR2F1Q13607 317 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 MRGPRG-AS1Q2M3A8 158 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 FAM209BQ5JX69 171 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 OR8G2PQ6IF36 304 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 ACOT7LQ6ZUV0 252 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 CENPVQ7Z7K6 275 aaPredicted RBP8.83□□□□□ -1
SHMT2-220ENST00000555634 FAM223AQ8IWN6 122 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 Q8N2B8 174 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 TTC9CQ8N5M4 171 aa8.83□□□□□ -1
SHMT2-220ENST00000555634 ZNF469Q96JG9 3925 aaPredicted RBP8.83□□□□□ -1
SHMT2-220ENST00000555634 BORCS7-ASMTA0A0B4J1R7 106 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 TMEM89A2RUT3 159 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 SMLR1H3BR10 107 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 CRYGCP07315 174 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 RNASE2P10153 161 aaKnown RBP8.82□□□□□ -1
SHMT2-220ENST00000555634 CTRB1P17538 263 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 S100A11P31949 105 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 EIF2B2P49770 351 aaKnown RBP8.82□□□□□ -1
SHMT2-220ENST00000555634 TPPP2P59282 170 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
SHMT2-220ENST00000555634 SSBP2P81877 361 aaPredicted RBP8.82□□□□□ -1
SHMT2-220ENST00000555634 EWSR1Q01844 656 aaKnown RBP eCLIP8.82□□□□□ -1
SHMT2-220ENST00000555634 AKR1C1Q04828 323 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 SLC38A11Q08AI6 406 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 ZNF266Q14584 549 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 CTRB2Q6GPI1 263 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 TEX38Q6PEX7 206 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 ETV3LQ6ZN32 361 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 TMEM252Q8N6L7 170 aa8.82□□□□□ -1
SHMT2-220ENST00000555634 NECAP1Q8NC96 275 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms