RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 HSPB9Q9BQS6 159 aa7.55□□□□□ -1.2
ACTN1-215ENST00000555616 QTRT1Q9BXR0 403 aaKnown RBP7.55□□□□□ -1.2
ACTN1-215ENST00000555616 TPSG1Q9NRR2 321 aa7.55□□□□□ -1.2
ACTN1-215ENST00000555616 HSPB7Q9UBY9 170 aa7.55□□□□□ -1.2
ACTN1-215ENST00000555616 HSPB11Q9Y547 144 aa7.55□□□□□ -1.2
ACTN1-215ENST00000555616 PRKDCP78527 4128 aaKnown RBP7.54□□□□□ -1.2
ACTN1-215ENST00000555616 FXYD6-FXYD2A0A087WZ82 144 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 TRAV14DV4A0A0A6YYC5 116 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 LINC01548A6NM66 108 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 CEBPZOSA8MTT3 80 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 NXPH3O95157 252 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 LY86O95711 162 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 CA2P00918 260 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-215ENST00000555616 IGF1P05019 195 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 PSMB6P28072 239 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 RPL23AP62750 156 aaKnown RBP7.54□□□□□ -1.2
ACTN1-215ENST00000555616 ID3Q02535 119 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 CFHR3Q02985 330 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 PJVKQ0ZLH3 352 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 IL15RAQ13261 267 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 RAB32Q13637 225 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 LRRC37A5PQ49AS3 106 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 CXorf66Q5JRM2 361 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-215ENST00000555616 KHDC1LQ5JSQ8 128 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 RNF152Q8N8N0 203 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 GRPEL2Q8TAA5 225 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 THAP6Q8TBB0 222 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 CIB3Q96Q77 187 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-215ENST00000555616 HINT2Q9BX68 163 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 GON7Q9BXV9 100 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 ENY2Q9NPA8 101 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 LINC00527Q9UJ94 153 aa7.54□□□□□ -1.2
ACTN1-215ENST00000555616 TEX50A0A1B0GTY4 177 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 A0A1W2PN81 502 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 K7EPK0 472 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 L7N2F9 121 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 SYNGR2O43760 224 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 SSSCA1O60232 199 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 MPC2O95563 127 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 PF4P02776 101 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 CHRNA7P36544 502 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
ACTN1-215ENST00000555616 HOXA1P49639 335 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-215ENST00000555616 POLR2GP62487 172 aaKnown RBP eCLIP7.53□□□□□ -1.2
ACTN1-215ENST00000555616 VAMP2P63027 116 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 PRCDQ00LT1 54 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 FOXE3Q13461 319 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 LGALSLQ3ZCW2 172 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-215ENST00000555616 C11orf87Q6NUJ2 197 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 TEX38Q6PEX7 206 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 ZNF562Q6V9R5 426 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 HSD17B13Q7Z5P4 300 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-215ENST00000555616 ABHD5Q8WTS1 349 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 ARPC1AQ92747 370 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 RAB40CQ96S21 281 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 MAGT1Q9H0U3 335 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 HIPK2Q9H2X6 1198 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 SLA2Q9H6Q3 261 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 BOLA1Q9Y3E2 137 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 LSM5Q9Y4Y9 91 aaKnown RBP7.53□□□□□ -1.2
ACTN1-215ENST00000555616 NOTCH3Q9UM47 2321 aa7.53□□□□□ -1.2
ACTN1-215ENST00000555616 E5RGE8 158 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 FCN1O00602 326 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 RGS13O14921 159 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 ARPC5O15511 151 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 DEDDO75618 318 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 IGHG4P01861 327 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 LYL1P12980 280 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 CD33P20138 364 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 CX3CL1P78423 397 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 ZNF345Q14585 488 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 FXYD3Q14802 87 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 PRSS54Q6PEW0 395 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 ZNF546Q86UE3 836 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 LINC00482Q8N8I6 264 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 DTD1Q8TEA8 209 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 SRSF12Q8WXF0 261 aaKnown RBP7.52□□□□□ -1.21
ACTN1-215ENST00000555616 RCC1LQ96I51 464 aaKnown RBP7.52□□□□□ -1.21
ACTN1-215ENST00000555616 SRSF8Q9BRL6 282 aaKnown RBP7.52□□□□□ -1.21
ACTN1-215ENST00000555616 RBKSQ9H477 322 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 HEYLQ9NQ87 328 aaPredicted RBP7.52□□□□□ -1.21
ACTN1-215ENST00000555616 NDUFA4L2Q9NRX3 87 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 MBD2Q9UBB5 411 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 TNFSF18Q9UNG2 199 aa7.52□□□□□ -1.21
ACTN1-215ENST00000555616 RCL1Q9Y2P8 373 aaKnown RBP7.52□□□□□ -1.21
ACTN1-215ENST00000555616 IGHV7-81A0A0B4J1V7 117 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 A0A0D9SG52 128 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 ATP6V0E1O15342 81 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 ELANEP08246 267 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 MYOD1P15172 320 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 CXCL2P19875 107 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 PSMB8P28062 276 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 NUP62P37198 522 aaPredicted RBP7.51□□□□□ -1.21
ACTN1-215ENST00000555616 SNCAP37840 140 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 TAS2R30P59541 319 aa7.51□□□□□ -1.21
ACTN1-215ENST00000555616 RPP30P78346 268 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms