RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 REG1AP05451 166 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 METTL15P1P0C7V9 234 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.11
SRP54-208ENST00000555557 NDPQ00604 133 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 FXYD3Q14802 87 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 TMUB2Q71RG4 321 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 TMEM217Q8N7C4 229 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 SIGLECL1Q8N7X8 197 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 C5orf56Q8N8D9 126 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 SRSF12Q8WXF0 261 aaKnown RBP8.09□□□□□ -1.11
SRP54-208ENST00000555557 AQP10Q96PS8 301 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 OR4C12Q96R67 309 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 HSPB9Q9BQS6 159 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 SMIM3Q9BZL3 60 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 ARL6Q9H0F7 186 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 HIPK2Q9H2X6 1198 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 ENY2Q9NPA8 101 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 IGHV7-81A0A0B4J1V7 117 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 MFSD2BA6NFX1 497 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 LINC01548A6NM66 108 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 GPR137BO60478 399 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 IFNA10P01566 189 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 AREGP15514 252 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 MAS1LP35410 378 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 EWSR1Q01844 656 aaKnown RBP eCLIP8.09□□□□□ -1.11
SRP54-208ENST00000555557 WT1-ASQ06250 92 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 ZNF562Q6V9R5 426 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 C19orf35Q6ZS72 473 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 LINC00469Q8N7U9 141 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 CIB3Q96Q77 187 aaPredicted RBP8.09□□□□□ -1.11
SRP54-208ENST00000555557 MOB4Q9Y3A3 225 aa8.09□□□□□ -1.11
SRP54-208ENST00000555557 TEX22C9J3V5 150 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 OR13C7P0DN81 318 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 TAS2R30P59541 319 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 BLCAPP62952 87 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 ARL16Q0P5N6 197 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 OR2F1Q13607 317 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 KCNRGQ8N5I3 272 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 TEX29Q8N6K0 151 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 SSMEM1Q8WWF3 244 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 CACFD1Q9UGQ2 172 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 PITPNC1Q9UKF7 332 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 STRAPQ9Y3F4 350 aaKnown RBP8.08□□□□□ -1.12
SRP54-208ENST00000555557 FBXO7Q9Y3I1 522 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 HIVEP2P31629 2446 aa8.08□□□□□ -1.12
SRP54-208ENST00000555557 A0A0D9SG52 128 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 IGLC7A0M8Q6 106 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 ZNF98A6NK75 572 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 C15orf62A8K5M9 175 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 HNF1AP20823 631 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 S100A11P31949 105 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 ZNF345Q14585 488 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 OPCMLQ14982 345 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 TUSC1Q2TAM9 212 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 C9orf152Q5JTZ5 239 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 OR8G2PQ6IF36 304 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 TMEM14EPQ6UXP3 125 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 Q6ZS46 218 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 HAPLN4Q86UW8 402 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 ABHD5Q8WTS1 349 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 LINC00052Q96N35 136 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 SLC25A31Q9H0C2 315 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 PRDM13Q9H4Q3 707 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 PFDN2Q9UHV9 154 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 MTORP42345 2549 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 A0A1W2PN81 502 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 HLA-DRB1P01911 266 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 EGR2P11161 476 aaPredicted RBP8.07□□□□□ -1.12
SRP54-208ENST00000555557 CHRNA7P36544 502 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 ERHP84090 104 aaKnown RBP8.07□□□□□ -1.12
SRP54-208ENST00000555557 CLINT1Q14677 625 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 SLC24A4Q8NFF2 622 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 ARPC1AQ92747 370 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 WFDC1Q9HC57 220 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 TMEM160Q9NX00 188 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 FBXL17Q9UF56 701 aa8.07□□□□□ -1.12
SRP54-208ENST00000555557 C2CD3Q4AC94 2353 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 BTBD17A6NE02 478 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 PMS2P5A8MQ11 134 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 INAFM1C9JVW0 142 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 FGF16O43320 207 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 FOSL1P15407 271 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 NPY1RP25929 384 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 SNCAP37840 140 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 SULT1A1P50225 295 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 STX12Q86Y82 276 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 LFNGQ8NES3 379 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 OR5C1Q8NGR4 320 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 OR5R1Q8NH85 324 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 P2RX4Q99571 388 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 PARP11Q9NR21 331 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 LINC00527Q9UJ94 153 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 VPREB3Q9UKI3 123 aa8.06□□□□□ -1.12
SRP54-208ENST00000555557 KANTRA0A1W2PQU2 76 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 ATP6V0E1O15342 81 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 CFDP00746 253 aaPredicted RBP8.05□□□□□ -1.12
SRP54-208ENST00000555557 IFNA4P05014 189 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 OR8U8P0C7N1 319 aa8.05□□□□□ -1.12
SRP54-208ENST00000555557 RNASE2P10153 161 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms