RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 Q56UQ5 140 aa18.41■□□□□ 0.54
PRKCH-216ENST00000555542 RBPMS2Q6ZRY4 209 aaKnown RBP18.41■□□□□ 0.54
PRKCH-216ENST00000555542 ARRDC1Q8N5I2 433 aa18.41■□□□□ 0.54
PRKCH-216ENST00000555542 OR52B4Q8NGK2 314 aa18.41■□□□□ 0.54
PRKCH-216ENST00000555542 SEC22AQ96IW7 307 aa18.41■□□□□ 0.54
PRKCH-216ENST00000555542 MTFP1Q9UDX5 166 aa18.41■□□□□ 0.54
PRKCH-216ENST00000555542 MFAP2P55001 183 aa18.4■□□□□ 0.54
PRKCH-216ENST00000555542 PIGPP57054 158 aa18.4■□□□□ 0.54
PRKCH-216ENST00000555542 CASC10Q5T4H9 136 aa18.4■□□□□ 0.54
PRKCH-216ENST00000555542 SCARB1Q8WTV0 552 aa18.4■□□□□ 0.54
PRKCH-216ENST00000555542 ZNF486Q96H40 463 aaPredicted RBP18.4■□□□□ 0.54
PRKCH-216ENST00000555542 ABHD1Q96SE0 405 aa18.4■□□□□ 0.54
PRKCH-216ENST00000555542 ZNF436Q9C0F3 470 aaPredicted RBP18.4■□□□□ 0.54
PRKCH-216ENST00000555542 MRPL27Q9P0M9 148 aaKnown RBP18.4■□□□□ 0.54
PRKCH-216ENST00000555542 STAB2Q8WWQ8 2551 aa18.39■□□□□ 0.54
PRKCH-216ENST00000555542 IGKV1-39P01597 117 aa18.39■□□□□ 0.53
PRKCH-216ENST00000555542 IGKV1D-39P04432 117 aa18.39■□□□□ 0.53
PRKCH-216ENST00000555542 ELLP55199 621 aaPredicted RBP18.39■□□□□ 0.53
PRKCH-216ENST00000555542 TAS2R19P59542 299 aa18.39■□□□□ 0.53
PRKCH-216ENST00000555542 ANKRD55Q3KP44 614 aa18.39■□□□□ 0.53
PRKCH-216ENST00000555542 SCGB2B2Q4G0G5 96 aa18.39■□□□□ 0.53
PRKCH-216ENST00000555542 SPSB3Q6PJ21 355 aa18.39■□□□□ 0.53
PRKCH-216ENST00000555542 MISP3Q96FF7 219 aa18.39■□□□□ 0.53
PRKCH-216ENST00000555542 ALDH3B2P48448 385 aa18.38■□□□□ 0.53
PRKCH-216ENST00000555542 AKR1C2P52895 323 aa18.38■□□□□ 0.53
PRKCH-216ENST00000555542 RND3P61587 244 aa18.38■□□□□ 0.53
PRKCH-216ENST00000555542 OR1P1Q8NH06 330 aa18.38■□□□□ 0.53
PRKCH-216ENST00000555542 TMEM190Q8WZ59 177 aa18.38■□□□□ 0.53
PRKCH-216ENST00000555542 C20orf24Q9BUV8 137 aa18.38■□□□□ 0.53
PRKCH-216ENST00000555542 COPZ2Q9P299 210 aa18.38■□□□□ 0.53
PRKCH-216ENST00000555542 RAB3DO95716 219 aa18.37■□□□□ 0.53
PRKCH-216ENST00000555542 SPCS2Q15005 226 aa18.37■□□□□ 0.53
PRKCH-216ENST00000555542 LHFPL1Q86WI0 220 aa18.37■□□□□ 0.53
PRKCH-216ENST00000555542 CLVS1Q8IUQ0 354 aaPredicted RBP18.37■□□□□ 0.53
PRKCH-216ENST00000555542 CCDC71LQ8N9Z2 235 aa18.37■□□□□ 0.53
PRKCH-216ENST00000555542 TMEM229BQ8NBD8 167 aa18.37■□□□□ 0.53
PRKCH-216ENST00000555542 ZFAND1Q8TCF1 268 aa18.37■□□□□ 0.53
PRKCH-216ENST00000555542 RETNQ9HD89 108 aa18.37■□□□□ 0.53
PRKCH-216ENST00000555542 K7EIM0 57 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 ATG12O94817 140 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 ERHP84090 104 aaKnown RBP18.36■□□□□ 0.53
PRKCH-216ENST00000555542 PRCDQ00LT1 54 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 TRIM16LQ309B1 348 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 OR2C3Q8N628 320 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 OR4D10Q8NGI6 311 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 ATP6V0BQ99437 205 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 CHRDL1Q9BU40 450 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 MIXL1Q9H2W2 232 aa18.36■□□□□ 0.53
PRKCH-216ENST00000555542 DAZ1Q9NQZ3 744 aaKnown RBP18.36■□□□□ 0.53
PRKCH-216ENST00000555542 GAR1Q9NY12 217 aaKnown RBP18.36■□□□□ 0.53
PRKCH-216ENST00000555542 TRAV25A0A0B4J276 109 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 C3orf85A0A1B0GTC6 90 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 RBMY1BA6NDE4 496 aaKnown RBP18.35■□□□□ 0.53
PRKCH-216ENST00000555542 RBMY1EA6NEQ0 496 aaKnown RBP18.35■□□□□ 0.53
PRKCH-216ENST00000555542 GABARAPH6UMI1 98 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 NDUFA4O00483 81 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 RBMY1DP0C7P1 496 aaKnown RBP18.35■□□□□ 0.53
PRKCH-216ENST00000555542 C8orf88P0DMB2 117 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 HSPE1P61604 102 aaKnown RBP18.35■□□□□ 0.53
PRKCH-216ENST00000555542 ZFAND6Q6FIF0 208 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 STEAP1BQ6NZ63 245 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 LINC00322Q6ZN03 302 aaPredicted RBP18.35■□□□□ 0.53
PRKCH-216ENST00000555542 TERB2Q8NHR7 220 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 RNASE11Q8TAA1 199 aaKnown RBP18.35■□□□□ 0.53
PRKCH-216ENST00000555542 TP53RKQ96S44 253 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 PDCD10Q9BUL8 212 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 EDA2RQ9HAV5 297 aa18.35■□□□□ 0.53
PRKCH-216ENST00000555542 IGHV3OR16-8A0A075B7F1 116 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 CTDSP2O14595 271 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 NUPL2O15504 423 aaKnown RBP18.34■□□□□ 0.53
PRKCH-216ENST00000555542 MRPS10P82664 201 aaKnown RBP18.34■□□□□ 0.53
PRKCH-216ENST00000555542 IZUMO4Q1ZYL8 232 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 SPINK9Q5DT21 86 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 SLC35G3Q8N808 338 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 RAB2BQ8WUD1 216 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 PINX1Q96BK5 328 aaKnown RBP18.34■□□□□ 0.53
PRKCH-216ENST00000555542 FAM110AQ9BQ89 295 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 HIPK2Q9H2X6 1198 aa18.34■□□□□ 0.53
PRKCH-216ENST00000555542 ZNF207O43670 478 aaKnown RBP18.33■□□□□ 0.52
PRKCH-216ENST00000555542 NOL3O60936 208 aaKnown RBP18.33■□□□□ 0.52
PRKCH-216ENST00000555542 CD74P04233 296 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 MFAP4P55083 255 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 RELQ04864 619 aaPredicted RBP18.33■□□□□ 0.52
PRKCH-216ENST00000555542 IL18Q14116 193 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 LAMTOR1Q6IAA8 161 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 OR13C8Q8NGS7 320 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 MARCH1Q8TCQ1 289 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 C5orf66Q9H5L9 145 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 NBEAL2Q6ZNJ1 2754 aa18.33■□□□□ 0.52
PRKCH-216ENST00000555542 F8W735 103 aaPredicted RBP18.32■□□□□ 0.52
PRKCH-216ENST00000555542 IFNA17P01571 189 aa18.32■□□□□ 0.52
PRKCH-216ENST00000555542 SSBP1Q04837 148 aaKnown RBP18.32■□□□□ 0.52
PRKCH-216ENST00000555542 MEF2DQ14814 521 aa18.32■□□□□ 0.52
PRKCH-216ENST00000555542 SP6Q3SY56 376 aa18.32■□□□□ 0.52
PRKCH-216ENST00000555542 ZNF114Q8NC26 417 aa18.32■□□□□ 0.52
PRKCH-216ENST00000555542 DIRAS2Q96HU8 199 aa18.32■□□□□ 0.52
PRKCH-216ENST00000555542 C14orf166Q9Y224 244 aaKnown RBP18.32■□□□□ 0.52
PRKCH-216ENST00000555542 YIF1AO95070 293 aa18.31■□□□□ 0.52
PRKCH-216ENST00000555542 MT-CO2P00403 227 aa18.31■□□□□ 0.52
PRKCH-216ENST00000555542 IGKV1-5P01602 117 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms