RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 DSTQ03001 7570 aaKnown RBP-0.27□□□□□ -2.45
SNX6-204ENST00000555541 RD3LP0DJH9 198 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 FGF6P10767 208 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 KCNE1P15382 129 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 DDTP30046 118 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 HOXA6P31267 233 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 KDELR2P33947 212 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 SPINT3P49223 89 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 ZNF137PP52743 207 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 FBXO48Q5FWF7 155 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 IBA57Q5T440 356 aaKnown RBP-0.27□□□□□ -2.45
SNX6-204ENST00000555541 FAM78BQ5VT40 261 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 LINC00575Q6W349 94 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 Q6ZS92 163 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 DEFB128Q7Z7B8 93 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 CLECL1Q8IZS7 167 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 MCFD2Q8NI22 146 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 EEF1AKMT1Q8WVE0 214 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 RASSF5Q8WWW0 418 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 ROPN1LQ96C74 230 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 COMMD5Q9GZQ3 224 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 HDHD2Q9H0R4 259 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 MS4A6AQ9H2W1 248 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 FAM96AQ9H5X1 160 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 EFCAB1Q9HAE3 211 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 SPACA1Q9HBV2 294 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 EURLQ9NYK6 297 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 PXMP4Q9Y6I8 212 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 EML6Q6ZMW3 1958 aa-0.27□□□□□ -2.45
SNX6-204ENST00000555541 ZNF106Q9H2Y7 1883 aaKnown RBP-0.27□□□□□ -2.45
SNX6-204ENST00000555541 NUP153P49790 1475 aaKnown RBP-0.28□□□□□ -2.45
SNX6-204ENST00000555541 LRPPRCP42704 1394 aaKnown RBP-0.28□□□□□ -2.45
SNX6-204ENST00000555541 ANAPC1Q9H1A4 1944 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 TRAV12-1A0A0B4J245 112 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 PQLC2LA1A4F0 135 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 OR4C45A6NMZ5 311 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 FAAHO00519 579 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 PROSCO94903 275 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 APOA1P02647 267 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 PRM2P04554 102 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 BAALC-AS2P0C853 105 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 MIFP14174 115 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 KCNJ3P48549 501 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 CXCR4P61073 352 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 TNFAIP6P98066 277 aaPredicted RBP-0.28□□□□□ -2.45
SNX6-204ENST00000555541 KHDC3LQ587J8 217 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 C1orf137Q5JT78 98 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 C1orf194Q5T5A4 169 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 GLT8D1Q68CQ7 371 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 KRTAP26-1Q6PEX3 210 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 LINC00322Q6ZN03 302 aaPredicted RBP-0.28□□□□□ -2.45
SNX6-204ENST00000555541 SLC51BQ86UW2 128 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 CRLF3Q8IUI8 442 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 CLVS1Q8IUQ0 354 aaPredicted RBP-0.28□□□□□ -2.45
SNX6-204ENST00000555541 OR5A1Q8NGJ0 315 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 C4orf3Q8WVX3 66 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 CMTM5Q96DZ9 223 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 DERL2Q9GZP9 239 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 C1orf109Q9NX04 203 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 JPT1Q9UK76 154 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 STRCQ7RTU9 1775 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 IGSF10Q6WRI0 2623 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 ZFYVE26Q68DK2 2539 aa-0.28□□□□□ -2.45
SNX6-204ENST00000555541 ALPK3Q96L96 1907 aa-0.28□□□□□ -2.46
SNX6-204ENST00000555541 RIMS2Q9UQ26 1411 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 BDP1A6H8Y1 2624 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 KIF15Q9NS87 1388 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 NCOR2Q9Y618 2525 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 HRNRQ86YZ3 2850 aaPredicted RBP-0.29□□□□□ -2.46
SNX6-204ENST00000555541 A0A0D9SG52 128 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 TLCD2A6NGC4 264 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 LYZL6O75951 148 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 CLDN12P56749 244 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 SLAMF1Q13291 335 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 RHEBQ15382 184 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 LRRC26Q2I0M4 334 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 AADACL3Q5VUY0 350 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 IQCF2Q8IXL9 164 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 BOD1L2Q8IYS8 172 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 PLPP5Q8NEB5 264 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 OR5L1Q8NGL2 311 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 PFN4Q8NHR9 129 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 JOSD2Q8TAC2 188 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 DNAJC9Q8WXX5 260 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 PACRGQ96M98 296 aaPredicted RBP-0.29□□□□□ -2.46
SNX6-204ENST00000555541 DKKL1Q9UK85 242 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 TP53TG1Q9Y2A0 90 aa-0.29□□□□□ -2.46
SNX6-204ENST00000555541 TRBV20OR9-2A0A075B6H5 130 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 TRAV3A0A0B4J244 114 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 NUPR2A6NF83 97 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 SMIM9A6NGZ8 99 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 DISC1C4P0D8 188 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 K7EIL1 84 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 TCL1BO95988 128 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 ORM1P02763 201 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 FAM228BP0C875 321 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 PET100P0DJ07 73 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 CCL1P22362 96 aa-0.3□□□□□ -2.46
SNX6-204ENST00000555541 CDC34P49427 236 aaPredicted RBP-0.3□□□□□ -2.46
SNX6-204ENST00000555541 CCL20P78556 96 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms