RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 TMEM68Q96MH6 324 aa16.01■□□□□ 0.15
FOXN3-209ENST00000555353 QTRT1Q9BXR0 403 aaKnown RBP16.01■□□□□ 0.15
FOXN3-209ENST00000555353 WRBO00258 174 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 ST8SIA3O43173 380 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 MED6O75586 246 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 SCGB1D2O95969 90 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 CDX1P47902 265 aaPredicted RBP16■□□□□ 0.15
FOXN3-209ENST00000555353 RAB9AP51151 201 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 SPCS3P61009 180 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 C18orf65Q6ZTR6 163 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 FYTTD1Q96QD9 318 aaKnown RBP16■□□□□ 0.15
FOXN3-209ENST00000555353 KLK15Q9H2R5 256 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 MSGN1A6NI15 193 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 SOX15O60248 233 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 CCNKO75909 580 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 RPL27AP46776 148 aaKnown RBP16■□□□□ 0.15
FOXN3-209ENST00000555353 TNFRSF9Q07011 255 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 C8orf86Q6ZUL3 223 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 AKAP14Q86UN6 197 aa16■□□□□ 0.15
FOXN3-209ENST00000555353 MRPL41Q8IXM3 137 aaKnown RBP16■□□□□ 0.15
FOXN3-209ENST00000555353 PET100P0DJ07 73 aa15.99■□□□□ 0.15
FOXN3-209ENST00000555353 ID3Q02535 119 aa15.99■□□□□ 0.15
FOXN3-209ENST00000555353 HINT2Q9BX68 163 aa15.99■□□□□ 0.15
FOXN3-209ENST00000555353 ENY2Q9NPA8 101 aa15.99■□□□□ 0.15
FOXN3-209ENST00000555353 ZNF355PQ9NSJ1 428 aa15.99■□□□□ 0.15
FOXN3-209ENST00000555353 HSPB7Q9UBY9 170 aa15.99■□□□□ 0.15
FOXN3-209ENST00000555353 TEX50A0A1B0GTY4 177 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 CEBPZOSA8MTT3 80 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 NXPH3O95157 252 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 RLN2P04090 185 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 APELAP0DMC3 54 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 S100A10P60903 97 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 FGL1Q08830 312 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 C10orf55Q5SWW7 151 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 OR5T1Q8NG75 326 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 MYOZ3Q8TDC0 251 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 UBE2E2Q96LR5 201 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 SLA2Q9H6Q3 261 aa15.98■□□□□ 0.15
FOXN3-209ENST00000555353 LY86O95711 162 aa15.97■□□□□ 0.15
FOXN3-209ENST00000555353 IL15RAQ13261 267 aa15.97■□□□□ 0.15
FOXN3-209ENST00000555353 PDLIM3Q53GG5 364 aaPredicted RBP15.97■□□□□ 0.15
FOXN3-209ENST00000555353 PPP1R1CQ8WVI7 109 aa15.97■□□□□ 0.15
FOXN3-209ENST00000555353 C4orf3Q8WVX3 66 aa15.97■□□□□ 0.15
FOXN3-209ENST00000555353 MS4A10Q96PG2 267 aa15.97■□□□□ 0.15
FOXN3-209ENST00000555353 PLEKHA3Q9HB20 300 aa15.97■□□□□ 0.15
FOXN3-209ENST00000555353 SYNGR2O43760 224 aa15.96■□□□□ 0.15
FOXN3-209ENST00000555353 MBPP02686 304 aaPredicted RBP15.96■□□□□ 0.15
FOXN3-209ENST00000555353 PVALBP20472 110 aaPredicted RBP15.96■□□□□ 0.15
FOXN3-209ENST00000555353 PSMB6P28072 239 aa15.96■□□□□ 0.15
FOXN3-209ENST00000555353 HOXA1P49639 335 aaPredicted RBP15.96■□□□□ 0.15
FOXN3-209ENST00000555353 PRCDQ00LT1 54 aa15.96■□□□□ 0.15
FOXN3-209ENST00000555353 LRRC37A5PQ49AS3 106 aa15.96■□□□□ 0.15
FOXN3-209ENST00000555353 HSD17B13Q7Z5P4 300 aaPredicted RBP15.96■□□□□ 0.15
FOXN3-209ENST00000555353 ZNF491Q8N8L2 437 aa15.96■□□□□ 0.15
FOXN3-209ENST00000555353 LSM5Q9Y4Y9 91 aaKnown RBP15.96■□□□□ 0.15
FOXN3-209ENST00000555353 NOTCH3Q9UM47 2321 aa15.96■□□□□ 0.15
FOXN3-209ENST00000555353 H3BUA1 57 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 TRGV3P03979 118 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 MYOD1P15172 320 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 TPPP2P59282 170 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 RAB32Q13637 225 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 ASPHD1Q5U4P2 390 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 OR2T35Q8NGX2 323 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 CIB3Q96Q77 187 aaPredicted RBP15.96■□□□□ 0.14
FOXN3-209ENST00000555353 SRSF8Q9BRL6 282 aaKnown RBP15.96■□□□□ 0.14
FOXN3-209ENST00000555353 HIPK2Q9H2X6 1198 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 RANGRFQ9HD47 186 aaPredicted RBP15.96■□□□□ 0.14
FOXN3-209ENST00000555353 NDUFA4L2Q9NRX3 87 aa15.96■□□□□ 0.14
FOXN3-209ENST00000555353 K7EPK0 472 aa15.95■□□□□ 0.14
FOXN3-209ENST00000555353 PFDN1O60925 122 aa15.95■□□□□ 0.14
FOXN3-209ENST00000555353 CD33P20138 364 aa15.95■□□□□ 0.14
FOXN3-209ENST00000555353 POLR2GP62487 172 aaKnown RBP eCLIP15.95■□□□□ 0.14
FOXN3-209ENST00000555353 KIAA0141Q14154 515 aaPredicted RBP15.95■□□□□ 0.14
FOXN3-209ENST00000555353 DTD1Q8TEA8 209 aa15.95■□□□□ 0.14
FOXN3-209ENST00000555353 RAB40CQ96S21 281 aa15.95■□□□□ 0.14
FOXN3-209ENST00000555353 MAGT1Q9H0U3 335 aa15.95■□□□□ 0.14
FOXN3-209ENST00000555353 RBKSQ9H477 322 aa15.95■□□□□ 0.14
FOXN3-209ENST00000555353 L7N2F9 121 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 CCL24O00175 119 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 MYCNOSP40205 109 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 VAMP2P63027 116 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 DEFB136Q30KP8 78 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 ETV3LQ6ZN32 361 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 THAP6Q8TBB0 222 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 OR5B12Q96R08 314 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 GNB4Q9HAV0 340 aa15.94■□□□□ 0.14
FOXN3-209ENST00000555353 SSSCA1O60232 199 aa15.93■□□□□ 0.14
FOXN3-209ENST00000555353 MPC2O95563 127 aa15.93■□□□□ 0.14
FOXN3-209ENST00000555353 ERHP84090 104 aaKnown RBP15.93■□□□□ 0.14
FOXN3-209ENST00000555353 SPINK9Q5DT21 86 aa15.93■□□□□ 0.14
FOXN3-209ENST00000555353 WDR89Q96FK6 387 aaPredicted RBP15.93■□□□□ 0.14
FOXN3-209ENST00000555353 RAX2Q96IS3 184 aa15.93■□□□□ 0.14
FOXN3-209ENST00000555353 ST6GAL2Q96JF0 529 aa15.93■□□□□ 0.14
FOXN3-209ENST00000555353 DUX3Q96PT4 197 aa15.93■□□□□ 0.14
FOXN3-209ENST00000555353 HEYLQ9NQ87 328 aaPredicted RBP15.93■□□□□ 0.14
FOXN3-209ENST00000555353 RPP30P78346 268 aaKnown RBP15.92■□□□□ 0.14
FOXN3-209ENST00000555353 TCTE3Q8IZS6 198 aa15.92■□□□□ 0.14
FOXN3-209ENST00000555353 RCL1Q9Y2P8 373 aaKnown RBP15.92■□□□□ 0.14
FOXN3-209ENST00000555353 TEX22C9J3V5 150 aa15.92■□□□□ 0.14
FOXN3-209ENST00000555353 E7EUB6 86 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms